Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g2142 ATGAGCTGTAAACACCAGAATTCAACTGTCTTGTCACTTCTCCATAGTTTTTGCCCTTTGAAAAATCCTGATGACATTGACGACCCAAGTGTCTTCAATTTTGGAATATTTATCGATGCTCTAAGATCTTCTACTGCCTTTGATGGGGTTTGTGTAATTTCTCTCGAGCAAGACCTTAAGACCAGTACGTTTATTGAGGAAATATTCTTCACTGTCTTCATTGCCATCTTCGGGTTGATTTTATTCGCGTTACTCATTGGAAACGTACAGAAATACCTACAGTCCATGCAATCTACCGTTGTTAGAGCTGAAGAAATGAGAGTTCACAGACAGCATATGGAGAAATGGATGTCCCAGCGTGTGCTACCAGAGCACTTGAAGGAAAGAATAAGACGATATGAACTTTACAAATGGGAAGAACATGAGGGTGTGGATGAAGAAACATTAATCCACAATCTTCCTAAAGATCTCAGAAGATACGTAAAGCGTTACCTTTTCTTAGATTTAATTAAAAGAGTGCCACCGTTTGAGGCACTGGGTGATGATCAGTTGTTGGATGCACTTTGTGATAGGCTGAAGCCAGTGCTTTATACAGAGAATAGCAACATTATTCATGAAGGAGATACGGCATGTGACTTTTATGGAGAGGAGCTTTTAACATGGGCCTGGGACCCCAACTCATCCTTAATTCTTCCCACTTCATCCAGAACAATGGAATCTCTGTCAGAAGTTGAAGCCTACTCTCTCATGGCTAATGACTTGAAGCTCATTGCTTCCCAATTTCGACGCCTTCACGGTAAACACATCCAACACACTTTTAGGTTCTATTCCTTGCAATGGAGGACATGGGCTGCCTGTTTTATACAACTAGCTTGGCGTCGCCACTGGAAAAGGAAGATTGAGAAACCTTCACGTGAAGCAGAAGACATGCTACAATATGCTTTAGCAACAAGCCTAGATGATTAG 966 0.4141 MSCKHQNSTVLSLLHSFCPLKNPDDIDDPSVFNFGIFIDALRSSTAFDGVCVISLEQDLKTSTFIEEIFFTVFIAIFGLILFALLIGNVQKYLQSMQSTVVRAEEMRVHRQHMEKWMSQRVLPEHLKERIRRYELYKWEEHEGVDEETLIHNLPKDLRRYVKRYLFLDLIKRVPPFEALGDDQLLDALCDRLKPVLYTENSNIIHEGDTACDFYGEELLTWAWDPNSSLILPTSSRTMESLSEVEAYSLMANDLKLIASQFRRLHGKHIQHTFRFYSLQWRTWAACFIQLAWRRHWKRKIEKPSREAEDMLQYALATSLDD 321
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Alju05g2142 321 Gene3D Helix hairpin bin 95 162 - -
Alju05g2142 321 SUPERFAMILY cAMP-binding domain-like 104 214 IPR018490 -
Alju05g2142 321 Gene3D Jelly Rolls 213 263 IPR014710 -
Alju05g2142 321 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 10 209 - -
Alju05g2142 321 Gene3D Jelly Rolls 163 212 IPR014710 -
Alju05g2142 321 ProSiteProfiles cAMP/cGMP binding motif profile. 181 214 IPR000595 -
Alju05g2142 321 Pfam Ion transport protein 59 99 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Alju05g2142 Alju-ChrAlju05 54695123 54696819 Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g2142 1 316 Ion Channels AT4G01010 51.524 2.87e-116 349