Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g2124 ATGGAATCTGAAACACGACGGAAAATCGAAGAAACGGTGCTGATTGTACTGAAGAGTTCCAACATTAATGAAGCGACTGAGTTCACTGTCCGACTCGCGTCCTCGGAACGACTCGGGATGGATCTTTCTGACTCGGAACACAAGCTGCTTGTGAGAGGCATTGTTGAGTCGTATCTGCTCGCTATCGCTGAGCAAGAAGATGGTAGGGTTCCGGCGTCTGAGCCGAGTGCTCCACAAGAGATAAGAGAGGTGGTGCAGTGTGAGGAGGAGGCGAAGCCAAACAAGGTGGTTACGGAGGACTCCGAGCACATAATTTGCCAGCTATCAAACAAGAGGAATGTGGTGGTTCATGATTTCAGAGGGAAAAAGTTAGTCTCAATCAGGGACTATTATGAGAAGGATGGAAAACAGCTTCCTTCAGCTAAAGGGATAAGTTTGCCGTCTGAACAATGGTCTGCCTTCAAGAAAAGTGTCCCTGCTATAGAGGAAGCCATTGCAAAGATGGAAGCAAAGATGGGATTCAAGGTTCGCGGTAAGCAAAATGGAGATGTGCTGAACCCCACTCATGGCAAGCAAAATGGAGATGTGCTGAACCCAACTCTTGGGAAGCAAAATGGAGACGTGCTGGACCCAACTCTTGGGAAGCAAAATGGAGACGTGCTGGACCCAACTCTTATAATTAGAAACAGAATGGATGATTGGAGAGCATTTGGTAGTGTTCTCTTACGCAGAGTCTTCTGGAGAAGTTTTTGGCTAGATTTGGTTGATATTAGTGCTGCCAAATCGATCATGAAGTTCCTCCTTGTAAGAGCAAGGCAAAAGAATAGCCACCAAAGAAAAAAGATAAAAAGGAAACATAATATTACCAGATTCACAAAGCTAGGACCTGTGATCCCTTTCAGTGCTCCAAGTAGCAGAAATTCACTATTACTTTCGCTCTTATGCACAAAACTTGGCGTCATACAAGAAAGAAAACAAGATCTTGAAACACTAGGTGGAGTTCGTTAA 1008 0.4494 MESETRRKIEETVLIVLKSSNINEATEFTVRLASSERLGMDLSDSEHKLLVRGIVESYLLAIAEQEDGRVPASEPSAPQEIREVVQCEEEAKPNKVVTEDSEHIICQLSNKRNVVVHDFRGKKLVSIRDYYEKDGKQLPSAKGISLPSEQWSAFKKSVPAIEEAIAKMEAKMGFKVRGKQNGDVLNPTHGKQNGDVLNPTLGKQNGDVLDPTLGKQNGDVLDPTLIIRNRMDDWRAFGSVLLRRVFWRSFWLDLVDISAAKSIMKFLLVRARQKNSHQRKKIKRKHNITRFTKLGPVIPFSAPSSRNSLLLSLLCTKLGVIQERKQDLETLGGVR 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g2124 335 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR 3 170 IPR045125 GO:0003713|GO:0060261
Alju05g2124 335 Pfam Transcriptional Coactivator p15 (PC4) 106 156 IPR003173 GO:0003677|GO:0006355
Alju05g2124 335 SUPERFAMILY ssDNA-binding transcriptional regulator domain 105 167 IPR009044 GO:0003677|GO:0006355
Alju05g2124 335 ProSiteProfiles DEK C-terminal (DEK-C) domain profile. 3 60 IPR014876 -
Alju05g2124 335 FunFam RNA polymerase II transcriptional coactivator KELP 97 169 - -
Alju05g2124 335 Gene3D Transcriptional Coactivator Pc4; Chain A 97 172 IPR009044 GO:0003677|GO:0006355
Alju05g2124 335 Pfam DEK C terminal domain 5 59 IPR014876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g2124 Alju-ChrAlju05 54568699 54577984 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Alju05g2124 DEK_C 3e-07 No_clan