Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g2113 ATGGAGGCCAAACCCCACCAACCATGCGCAGCTTGCAGGATGCTTCGCCGGAGATGTGACTCCAAGTGCCTTCTCTCCCCATACTTTCCGGCTGACGAGCTCGACAAGTTCGCCGTAGTCCACCGAGTCTTCGGCGCCAGCAACGTTATCAAAATGATTCAGATGGTGGAGGAGACGAAGAGGGAGGATGCAGTGAAAGCGATAGTGTACGAGGCAATGGCGAGGGTGAGGGATCCTGTGTATGGCAGTGCAGGGGCTATCCAACAGCTGCAGAACATGGTTCAGCAGCTCAAGGTGGAGGTGGAAACCATGAAGGCTAGGGTTTCAGAGGTGCAACAACAAACAGACCAGTTGCTCATCAATATTAACACTCATACCCACCATCATCTTCATAATATTGATAATCCTATTCCTCATCATCAGTTTCCCATCAATAATAATGTCCAAGACCCTTTCTTTGATGACTATTACTCTTCCTTTTCATCCGATCCAATTGATCATCAATTTCCTCTCCAAGCCGACTGGGTCTTGTAA 534 0.4869 MEAKPHQPCAACRMLRRRCDSKCLLSPYFPADELDKFAVVHRVFGASNVIKMIQMVEETKREDAVKAIVYEAMARVRDPVYGSAGAIQQLQNMVQQLKVEVETMKARVSEVQQQTDQLLININTHTHHHLHNIDNPIPHHQFPINNNVQDPFFDDYYSSFSSDPIDHQFPLQADWVL 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g2113 177 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 7 126 - -
Alju05g2113 177 ProSiteProfiles LOB domain profile. 7 108 IPR004883 -
Alju05g2113 177 Pfam Lateral organ boundaries (LOB) domain 8 105 IPR004883 -
Alju05g2113 177 Coils Coil 87 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g2113 Alju-ChrAlju05 54461553 54462202 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g2113 1 134 AS2 family AT2G30130 47.015 3.15e-40 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Alju05g2113 LOB 4.1e-38 No_clan