Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g2107 ATGGAAGGAATACCTAATAATCAAAACTCAGTGACAAAGCCACCAGTAATGGTGGAGAAGAAGGCAAGGCCACATGAACAATTGAACTGTCCAAGGTGCAATTCAACCAACACCAAGTTCTGCTACTACAACAACTATAGCCTCACACAGCCCAGATACTTCTGCAAGACTTGTAGAAGGTACTGGACAGAAGGTGGGTCCCTCAGAAACATCCCAGTTGGAGGAGGTTCTAGAAAGAACAAGAACAAGATCATCACTTCCTCCTCAGCTTCCTCTTCTTCATCATCATCAACCTCATCATCTTCAAAGCTTCCTGATCTAAACCCACCATTATTACCGAGTCTCTCAGGGTTTAAAGATCCAAGTTTGAATCTTTCTAGAAGCTTCCCAATTTCCAACCAGCAAAACCCTAAGATCCATGGAGGCCAAGATCTTAATCTGGCTTTTCCAACTTCTTCTTCGCTTTCAGCTCCTAGGGTTTTCAATAGTAATAATAATATTCCTTATGTTCCTTCATTCATGATGATGCCAAATACCTCGTATGGTGGTAATCTTAATAATTACCCATCCGGGATAATTCCCATGCAAGAGGAAACTAAACCTAGCCATAATAATATGGGATTTTCTGTGGATGGGCTTGGAAATAGATCGTACGGTGTACAAGAGAATGATCATAATAATGGAGGGAGGCTTTTGCTTCCTTTTGGAGGAGTCAAGCAGATTCCAGGTGGTGGTGATGAAGTAGTTGAACAAAATAATAAAGAACAAGGGAATTCAGGTGGGTTTTGGACTGGAATGATTGGTGACGGATCATGGTAA 819 0.4151 MEGIPNNQNSVTKPPVMVEKKARPHEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKNKIITSSSASSSSSSSTSSSSKLPDLNPPLLPSLSGFKDPSLNLSRSFPISNQQNPKIHGGQDLNLAFPTSSSLSAPRVFNSNNNIPYVPSFMMMPNTSYGGNLNNYPSGIIPMQEETKPSHNNMGFSVDGLGNRSYGVQENDHNNGGRLLLPFGGVKQIPGGGDEVVEQNNKEQGNSGGFWTGMIGDGSW 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g2107 272 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 17 186 IPR045174 GO:0003700|GO:0006355
Alju05g2107 272 MobiDBLite consensus disorder prediction 80 107 - -
Alju05g2107 272 ProSiteProfiles Zinc finger Dof-type profile. 28 82 IPR003851 GO:0003677|GO:0006355
Alju05g2107 272 Pfam Dof domain, zinc finger 26 82 IPR003851 GO:0003677|GO:0006355
Alju05g2107 272 MobiDBLite consensus disorder prediction 1 28 - -
Alju05g2107 272 ProSitePatterns Zinc finger Dof-type signature. 30 66 IPR003851 GO:0003677|GO:0006355
Alju05g2107 272 MobiDBLite consensus disorder prediction 69 113 - -
Alju05g2107 272 MobiDBLite consensus disorder prediction 253 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g2107 Alju-ChrAlju05 54351568 54352386 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g2107 16 272 C2C2-Dof Transcription Factor Family AT3G61850 41.958 3.36e-51 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Alju05g2107 zf-Dof 7.2e-33 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju05g2107 05 54351568 54352386 Alju05g2107 05 54351568 54352386 ECH