Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g2095 ATGTTAGATCACCACCACCACCATGCTGCCATGGAATATTCTCATTTAGCAGAAGCAGAAGCTTATAGCAGCACAGTTCCATCGTTAGGAGGAGTCACAACAAGGAAGAGGAAGGGCAACAAAATCCAGAGAAGGTTCAGTGATGATCAGATCAGATCACTGGAATCCATGTTTGAGACAGAGTCAAGGCTTGAGCCGAGGAAGAAGGTTCAGCTTGCAAGAGAGCTTGGGTTGCAGCCAAGACAGGTTGCTATCTGGTTCCAGAACAAAAGGGCAAGATGGAAGTCAAAGCAGATTGAAAGAGACTATAACATACTTAGAGCTAATTACACAAACTTGGCCTCAAGGTTCGAAGCTCTGAAGAAGGAGAAGGAAGCATTGCTAATTCAGTTGCAGAAGCTGAATGATCTAATACAGAAGCCAAACGAGGAAGCTCGCCAGGGGTATAATACACAAGTCAAACCAGCAAACAGCATGGACAGTGTATCAGAATATGGGGACAACATTAAAGTGAAGGCTGAGGAAAATCCAAGCTCAACAACAATGGAGAGATCAGAGCAGGTGGTGGGTGTTCTGTCAGATGATGACAGCAGTATAAAAGCAGAATACTTTGGGCTTGAAGATGAACCTAATACTCTTCTGAATTTCGTGGAGCAAGCAGATGATTCCCTGAATTTTGATTCTGATGAACTCATAGACCAGTCTGGTGTTGGTTACCAGTGGTGGGACTTTTGGTCCTGA 741 0.4426 MLDHHHHHAAMEYSHLAEAEAYSSTVPSLGGVTTRKRKGNKIQRRFSDDQIRSLESMFETESRLEPRKKVQLARELGLQPRQVAIWFQNKRARWKSKQIERDYNILRANYTNLASRFEALKKEKEALLIQLQKLNDLIQKPNEEARQGYNTQVKPANSMDSVSEYGDNIKVKAEENPSSTTMERSEQVVGVLSDDDSSIKAEYFGLEDEPNTLLNFVEQADDSLNFDSDELIDQSGVGYQWWDFWS 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g2095 246 ProSitePatterns 'Homeobox' domain signature. 72 95 IPR017970 GO:0000981|GO:0006355
Alju05g2095 246 FunFam Homeobox-leucine zipper protein ATHB-7 24 97 - -
Alju05g2095 246 SUPERFAMILY Homeodomain-like 23 98 IPR009057 -
Alju05g2095 246 PRINTS Lambda-repressor HTH signature 68 77 IPR000047 GO:0003677
Alju05g2095 246 PRINTS Lambda-repressor HTH signature 77 93 IPR000047 GO:0003677
Alju05g2095 246 Pfam Homeobox associated leucine zipper 97 138 IPR003106 GO:0006355|GO:0043565
Alju05g2095 246 CDD homeodomain 41 98 IPR001356 GO:0003677
Alju05g2095 246 Coils Coil 103 137 - -
Alju05g2095 246 Gene3D - 32 104 - -
Alju05g2095 246 SMART HOX_1 40 101 IPR001356 GO:0003677
Alju05g2095 246 ProSiteProfiles 'Homeobox' domain profile. 37 97 IPR001356 GO:0003677
Alju05g2095 246 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 40 182 IPR045224 GO:0003700
Alju05g2095 246 Pfam Homeodomain 44 95 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g2095 Alju-ChrAlju05 54175667 54176605 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g2095 21 246 Homeobox Transcription Factor Family AT2G46680 52.209 2.43e-64 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Alju05g2095 Homeodomain 1.6e-16 CL0123