Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g2091 ATGGACGACCTCCTCCTCTCCCCCTCTTCTCCTCCATCTCTCCTCTCCTTCTCTCACTCTCCTCCTCCGCCTCCTCCTCCTCTTCAGAGCAAGCTTCAATCATTACTTCAATCCCAGCCCCACTCCTGGCTCTACGCCATTTTCTGGCAAACCTCCCACAACGACCACGCCCACCTCCGTCTCTCCTGGGCCCACGGTCACTTCCATGGCTCCGATCATCATCGTCCCCGCCATAACAACAACAACTTCTTCAAAGGTCTTGAATCTCTCGTCGACGACAACCTTAACGACGCCGAGTGGTTCTACGTCATGTCCTTGACTCGCACTTTTCCTCTCTCTCCTGATTCCTCCTCCGCCGCCTCCCTCCCCGCCAAGGCCTTCTCCTCCGGTTCTCCCCTCTGGTTGAATATCAGCCACCAAGATCTTCACTTTCACGGCTGCGACAGAGCCAAAGAAGCTTCCCTGCATGGGATTCGAACCCTCATCTGTGTTCCCACCTCCCACGGAGTTCTCGAAATGGGTTCCACTGAAATCATTCCCAAGAACTCCACTCTCATCCAGCAAGTTAAATCTCTGTACGGCTCCTCCGATCTGATCACCCCACTCCTCACACCCTCTGATAATCAGCCCGAACAAGTTGATTTCTTGGACGTCGATGAGACCATTTCTTTTGCCGACATTGGCATTATGACCGGCCCGCCTGTAGTAGAAGATGAAAAGCCACCGGTTAATTCATCATGCGGTAATAATAAATCCCGAAAGACAGATCCTCGTCTCCAGCTCAGATCTTACGTGGACTCAGAGCATTCTCATTCGGATTCCGACGGGCCTATCATAGAGAAAACGCCGCCCAAGAAGAGAGGAAGAAAGCCCGGGCTAGGCCGCGAGACGCCGCTCAACCACGTGGAAGCTGAGCGGCAGCGCCGGGAGAAGTTGAACCACCGTTTCTACGCGCTACGCGCCGCAGTCCCGCATGTGACGAGGATGGACAAGGCTTCGCTGTTATCGGACGCTGTCTCTTACATCAACGAGCTCAAAGCCAAGATCGAGAAACTTGAGTCGCTGGTTCCAAGGGAATCCACCAGTATGAACAGTGGCAGGAAGGTGAAGCTGGAAATGGCGGACACGGTGGAGTCGACGGTGGAGCAGGCCAAGCCCAGCGGGCGGTGCTTGAGGCTGGGCCTGGGCCTGGGCGGGCTGGAGGTGGACGTCAGGATCATGGGCCAGGACGCAATGGTCAGAGTTCAGTCGGAGAACAGGAAACACCCCGGAGCGCGGCTGATGGACGCGCTGCGAGACTTAGAGCTGAAGGTACACCATGCGAGCATGTCATGCGTCAACGACGTCATGCTTCAAGACGTCGTCGTTCAGATCCCTCAAGGCCTGAGCAGCGACGAGGGCTTCATTAGATCTGCTATTCTCAGGAGACTGGACCAGTAG 1440 0.5563 MDDLLLSPSSPPSLLSFSHSPPPPPPPLQSKLQSLLQSQPHSWLYAIFWQTSHNDHAHLRLSWAHGHFHGSDHHRPRHNNNNFFKGLESLVDDNLNDAEWFYVMSLTRTFPLSPDSSSAASLPAKAFSSGSPLWLNISHQDLHFHGCDRAKEASLHGIRTLICVPTSHGVLEMGSTEIIPKNSTLIQQVKSLYGSSDLITPLLTPSDNQPEQVDFLDVDETISFADIGIMTGPPVVEDEKPPVNSSCGNNKSRKTDPRLQLRSYVDSEHSHSDSDGPIIEKTPPKKRGRKPGLGRETPLNHVEAERQRREKLNHRFYALRAAVPHVTRMDKASLLSDAVSYINELKAKIEKLESLVPRESTSMNSGRKVKLEMADTVESTVEQAKPSGRCLRLGLGLGGLEVDVRIMGQDAMVRVQSENRKHPGARLMDALRDLELKVHHASMSCVNDVMLQDVVVQIPQGLSSDEGFIRSAILRRLDQ 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g2091 479 Pfam Helix-loop-helix DNA-binding domain 300 345 IPR011598 GO:0046983
Alju05g2091 479 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 28 192 IPR025610 -
Alju05g2091 479 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 296 345 IPR011598 GO:0046983
Alju05g2091 479 MobiDBLite consensus disorder prediction 231 307 - -
Alju05g2091 479 MobiDBLite consensus disorder prediction 1 32 - -
Alju05g2091 479 MobiDBLite consensus disorder prediction 15 30 - -
Alju05g2091 479 SMART finulus 302 351 IPR011598 GO:0046983
Alju05g2091 479 Gene3D - 295 382 IPR036638 GO:0046983
Alju05g2091 479 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 297 360 IPR036638 GO:0046983
Alju05g2091 479 Coils Coil 335 355 - -
Alju05g2091 479 PANTHER MYC 24 476 IPR045084 GO:0003700|GO:0006355
Alju05g2091 479 MobiDBLite consensus disorder prediction 255 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g2091 Alju-ChrAlju05 54105702 54107141 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g2091 28 458 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G17880 34.165 2.75e-88 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Alju05g2091 bHLH-MYC_N 7.3e-39 CL0161