Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g2087 ATGAGCATGAATGCCGCGAAATCTCGTACCCGTGTTGGAAAATACGAGTTGGGTAAAACCATTGGCGAGGGTAGCTTCGCCAAGGTGAAGTTTGCGAGAAACGTTGAGACAGGGCAGCACGTCGCCATCAAAATCCTCGACCGTAACCATGTTCTTCGACACAAGATGGTGGAACAGCTGAAGAGAGAAATTTCCACCATGAAGCTGATCAAGCATCCGAATGTTGTCAATATATTTGAGGTGATGGCAAGTAAAACAAAGATTTACATTGTCCTGGAGTTTGTTTGTGGGGGAGAACTATTTGACAAAATAGCTAATGATGGGAAGCTTAAGGAGAATGAAGCAAGGCAATATTTCCAACAACTTATTAATGCTGTTGATTACTGCCATAGTAGAGGTGTCTTTCACAGAGACTTGAAGCCTGAGAATCTTCTTCTGGACTCAAATGGTATTCTTAAAGTTTCAGATTTTGGACTGAGTACATACTCACAGCAAGATGATGCACTGCTACGCACTGCCTGTGGAACCCCTAATTATGTTGCTCCTGAGGTGCTTAATGCTAATACTAAAGGCTATGATGGTTCAGCAGCTGATATTTGGTCATGTGGCGTCATTCTCTTTGTTCTGATGGCTGGATACTTACCTTTTGATGAACCAAGTCAAATGGTTTTGTATAAAAAAATTAGCAAGGCTGAATTCTCATACCCATCACGGTTTCCACCAGATGCAAAGAAACTGCTGAATCGTATTCTTGATCCAAACCCTCTCACAAGGATAAAAATTTCGGAAATCTTGGAAGATAAATGGTTCAAGGAAGGATACAAACCACCATGTTTTGAAGAGGAAGAGGGTATAAATGTAGATGATGTAGCTGCGGCCTTCAATGATTCCAAGGAAAACCTTGTGACAGAAAGGAAAGAAAAACCCGTCTCCATGAATGCTTTTGAGCTCATTTCGAGGTCACAGAGTTTCAATCTTGACAGTTTGTTTGAGAAAGAGATGGGCATTGTGAGGCGAGAAACACGATTTACTTCTCAGCGCCCACCTCATGAAATTATATCTAAAATTGAGGAAGCTGCCAAACCACTGGGATTTAATGTTCACCGGCGTAACTACAAGATGAAGCTCCAAGGCGACAAGAGTGGAAGGAAGGGACACCTCTCTGTGGCTACTGAGGTTTTTGAAGTGGCTCCCTCATTGCACATGGTGGAGTTGCGGAAGACTGGGGGTGACACACTGGAGTTTCACAAGTTCTACAAAAAGTTTTCATCAGGTTTGCAAGATGTAGTATGGCACCCTGAAGGAAAAAACGAAGAAAAACTTGAACAATCAAGTGTTTGCACTTATTGTGTGGTTCACCGAAGGCATGAGTTTTTTGGCCAATGCCAGAACATGTATAAGCTGGCTGGAATGGGCAAAGTTGATCTAGATCATGCCCAAGAGACTGGAAAGAGTGTTTTGGCTGTCTTTCTGGTTGATGAATGTACAACCTTGAGTTTTATTCTCACTCTCTCCGCTCTGCTTCAGATTCACCCTTTTCTTCATTCCCCTATTTTACCTAGAAGTGGACGGACAGTGAGCGGATCTAGTGATGTCGCCGGCGAAGAAGCTACCACAAGGATTGCGACGACGGAGTGGATGCAGAGACGAGGATGCGATGGTTACAGCTTAGAGTTTGAGATGAATTCATTTTTTTACTTGATGGATCTATTGAGGATGAGAGACATATTTGTAATATTATGA 1743 0.4269 MSMNAAKSRTRVGKYELGKTIGEGSFAKVKFARNVETGQHVAIKILDRNHVLRHKMVEQLKREISTMKLIKHPNVVNIFEVMASKTKIYIVLEFVCGGELFDKIANDGKLKENEARQYFQQLINAVDYCHSRGVFHRDLKPENLLLDSNGILKVSDFGLSTYSQQDDALLRTACGTPNYVAPEVLNANTKGYDGSAADIWSCGVILFVLMAGYLPFDEPSQMVLYKKISKAEFSYPSRFPPDAKKLLNRILDPNPLTRIKISEILEDKWFKEGYKPPCFEEEEGINVDDVAAAFNDSKENLVTERKEKPVSMNAFELISRSQSFNLDSLFEKEMGIVRRETRFTSQRPPHEIISKIEEAAKPLGFNVHRRNYKMKLQGDKSGRKGHLSVATEVFEVAPSLHMVELRKTGGDTLEFHKFYKKFSSGLQDVVWHPEGKNEEKLEQSSVCTYCVVHRRHEFFGQCQNMYKLAGMGKVDLDHAQETGKSVLAVFLVDECTTLSFILTLSALLQIHPFLHSPILPRSGRTVSGSSDVAGEEATTRIATTEWMQRRGCDGYSLEFEMNSFFYLMDLLRMRDIFVIL 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g2087 580 ProSitePatterns Serine/Threonine protein kinases active-site signature. 134 146 IPR008271 GO:0004672|GO:0006468
Alju05g2087 580 FunFam Non-specific serine/threonine protein kinase 306 432 - -
Alju05g2087 580 Pfam Protein kinase domain 15 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju05g2087 580 CDD CIPK_C 313 426 - -
Alju05g2087 580 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 10 421 - -
Alju05g2087 580 FunFam Non-specific serine/threonine protein kinase 8 310 - -
Alju05g2087 580 FunFam Non-specific serine/threonine protein kinase 6 94 - -
Alju05g2087 580 Pfam NAF domain 309 368 IPR004041 GO:0007165
Alju05g2087 580 Gene3D Kinase associated domain 1, KA1 306 432 - -
Alju05g2087 580 ProSiteProfiles NAF domain profile. 307 331 IPR018451 GO:0007165
Alju05g2087 580 Gene3D Phosphorylase Kinase; domain 1 4 94 - -
Alju05g2087 580 SMART serkin_6 15 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju05g2087 580 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Alju05g2087 580 SUPERFAMILY Protein kinase-like (PK-like) 12 286 IPR011009 -
Alju05g2087 580 ProSiteProfiles Protein kinase domain profile. 15 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju05g2087 580 Gene3D Transferase(Phosphotransferase) domain 1 95 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g2087 Alju-ChrAlju05 54042831 54049281 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g2087 8 440 CBL-interacting serine-threonine protein kinases AT1G01140 73.864 0.0 673
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Alju05g2087 Pkinase 1e-71 CL0016