Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g2080 ATGGGGAAGAAAAAAGGAGGTAGCTCATGGTTGAATGCCGTCAAAAGAGCCTTCAGATCTCCAACCAAAGACCAAATCGACGAAGACAAGAAAAGAGAAAAACGAAGATGGATCTTCAGAAAACCGGTAATAAACCACGAATCACCGAGTTCCCAACAAACCCCAGCAGAGCAGAAGCCTGATGTTGCTGAGGATGCAACAGATCAAAAGCACGCGCTGGCTGTGGCGGTCGCCGCTGCCGAGGCAGCCATGGCCACAGCTCAGGCGGCTGTGGAAGCGGCCAGACTGACCAGACCACTTAATCACACTAAGGAGCACTATGCAGCTATTGTGATTCAAACTGCTTTCAGAGGATACTTAGCAAGAAGCGCTCTTCGAGCTTTGAAGGGGCTGGTAAAATTGCAAGCATTAGTAAGGGGTCACAATGTTCGGAAGCAAGCGAAGATGACACTTCGGTGCATGCAGGCTCTGGTCAGAGTTCAAGCTCGGGTGGTTGATCAGCGCGTGAGGCTGTCACATGATGGAAGCAGTAGAAAATCAACGTTTAGTGACACAAATAGCCTCTTGGAATCGCGTTATCTTCAGGACATTTCAGATAGAAGATCAATGTCAAGAGAAGGAAGCAGTATTGCAGATGATTGGGATGAAAGGCCACACACAGTTGAAGAAATTAAAGCTTTGTTGAGACAGAGGAAGGAGGCTGCTTTGAAGCGAGACAAGTCTTTGTCTCAAGCTTTCTCTCAACAGGTCTGGAGAACCGCAAGAAGGCCGTCGATTGGGAATGAAGAGGAGCTGGAGGAGAGGCCGGCGTGGTTGGAGCGGTGGATGGCGGCGAAGCCGCGGGCGATGAGGGGGAGATCATCGGTTGATCATCAAAGAGATACTATCAAGACAGTAGAAATGGACACATCTCGTCCTTACTCATCATATTTAGGATCTAACTACAGAAAATCACACCCAAATTACCAATATAATCCACACCAACATCAGCCTCAAAGACACTCTGTAGCATCTCCATTCCACCAAAACGCGTCGTCCTCGTCATCTCTTCACCATTCCCCTGCAACCCCGTCCCCTGCGAAATTCCGGCCAATCCAAGTCCAGTCGGCGAGCCCTCGCTGTGTCAGGGAAGATAGAAGCTTCCACAGCACATCTCAAACACCAAGCTTGAGGTCCAACTATCATTACACAGGAAGCTTGTACCAATGTGGAAGAGGTGGAGGAGGAAGCAGCAACAATGGCGGCTCTTCCTTGCCTAATTACATGGCGGCGACCGAGTCTGCCAAGGCGAGGATCCGGTCTCTGAGCGCGCCGAGGCAGAGGCCTTCAACATCAGAGAGAGACAGAGTTGGATCAGCAAAGAAGAGGCTTTCTTTCCCTGCTCATCCTCCTGGAGATGCCTATGCTTATGGCGGTTATAGCAGTTATGGTAGTTATGGACATAGTATGAGGAGTCCAAGCTTCAAGAGTGTGAGTGGATCACATTATGGAATGGATCAAGTTTCCATATATTCTTCTTGCTGCACAGAGAGCCTTGCTACTGCTGCTGACATGTCTCCTTCAGCTGCTGATCTTAGAAGGTAG 1584 0.4943 MGKKKGGSSWLNAVKRAFRSPTKDQIDEDKKREKRRWIFRKPVINHESPSSQQTPAEQKPDVAEDATDQKHALAVAVAAAEAAMATAQAAVEAARLTRPLNHTKEHYAAIVIQTAFRGYLARSALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQARVVDQRVRLSHDGSSRKSTFSDTNSLLESRYLQDISDRRSMSREGSSIADDWDERPHTVEEIKALLRQRKEAALKRDKSLSQAFSQQVWRTARRPSIGNEEELEERPAWLERWMAAKPRAMRGRSSVDHQRDTIKTVEMDTSRPYSSYLGSNYRKSHPNYQYNPHQHQPQRHSVASPFHQNASSSSSLHHSPATPSPAKFRPIQVQSASPRCVREDRSFHSTSQTPSLRSNYHYTGSLYQCGRGGGGSSNNGGSSLPNYMAATESAKARIRSLSAPRQRPSTSERDRVGSAKKRLSFPAHPPGDAYAYGGYSSYGSYGHSMRSPSFKSVSGSHYGMDQVSIYSSCCTESLATAADMSPSAADLRR 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g2080 527 Coils Coil 77 97 - -
Alju05g2080 527 ProSiteProfiles IQ motif profile. 129 156 IPR000048 GO:0005515
Alju05g2080 527 MobiDBLite consensus disorder prediction 433 458 - -
Alju05g2080 527 Gene3D - 102 158 - -
Alju05g2080 527 SMART iq_5 104 126 IPR000048 GO:0005515
Alju05g2080 527 SMART iq_5 127 148 IPR000048 GO:0005515
Alju05g2080 527 MobiDBLite consensus disorder prediction 301 355 - -
Alju05g2080 527 PANTHER IQ-DOMAIN 5-RELATED 1 461 - -
Alju05g2080 527 MobiDBLite consensus disorder prediction 20 35 - -
Alju05g2080 527 FunFam IQ-domain 11 104 155 - -
Alju05g2080 527 MobiDBLite consensus disorder prediction 284 300 - -
Alju05g2080 527 Pfam Protein of unknown function (DUF4005) 371 485 IPR025064 -
Alju05g2080 527 MobiDBLite consensus disorder prediction 281 394 - -
Alju05g2080 527 ProSiteProfiles IQ motif profile. 105 133 IPR000048 GO:0005515
Alju05g2080 527 Pfam IQ calmodulin-binding motif 108 126 IPR000048 GO:0005515
Alju05g2080 527 Pfam IQ calmodulin-binding motif 132 148 IPR000048 GO:0005515
Alju05g2080 527 MobiDBLite consensus disorder prediction 1 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g2080 Alju-ChrAlju05 53983482 53986362 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g2080 10 527 IQD Protein Family AT4G00820 53.333 9.87e-163 471