Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g2077 ATGGATGTTGGTCCCTTTCTGAGCTTCTCAAACCCTAGAATCACATTTTGCAGCCGAGCGCCAAACTGCGGGGAACAAATCTACTCTCATCTCAGTTGCCTGAGCTTAAAAATGTCGATTGGAGAGACTGTTTGCACTTACGCGGTTCTGATCCTCCATGATGATGGCATTCCGATCACTGCTGAGAAGATATCGACCATCTTGAAGGCGGCAAATGTTCAGGTTGAATCTTATTGGCCAAGCTTGTTCGCTAAACTTGCTGAGAAGCGAAACATTGAGGATTTGATAGTAAATGCTGGAGGAGGCGGGGCTCCGGTTGCCGTTGCGGCAGTCCCAGCTGCGGCTGGTGGCGGCGGTGGCACAGCGGCTCCTCCTCCTGCTGAGGAGAAGAAGGAAGAGCCCCAAGAAGAGAGCGATGGTGACTTGGGATTCAGCTTGTTTGATTAG 447 0.5123 MDVGPFLSFSNPRITFCSRAPNCGEQIYSHLSCLSLKMSIGETVCTYAVLILHDDGIPITAEKISTILKAANVQVESYWPSLFAKLAEKRNIEDLIVNAGGGGAPVAVAAVPAAAGGGGGTAAPPPAEEKKEEPQEESDGDLGFSLFD 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g2077 148 MobiDBLite consensus disorder prediction 115 148 - -
Alju05g2077 148 Hamap 50S ribosomal protein L12 [rpl12]. 43 148 IPR027534 GO:0003735|GO:0005840|GO:0006414
Alju05g2077 148 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P1 38 148 - -
Alju05g2077 148 CDD Ribosomal_P1 42 98 - -
Alju05g2077 148 Gene3D - 38 100 IPR038716 -
Alju05g2077 148 FunFam 60S acidic ribosomal protein P1 38 100 - -
Alju05g2077 148 Pfam 60s Acidic ribosomal protein 59 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g2077 Alju-ChrAlju05 53912019 53914176 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g2077 38 148 Cytoplasmic Ribosomal Protein Gene Family AT5G24510 54.955 4.21e-37 121