Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g2069 ATGGGTGAAGTTGTCGTGCGGACGGATGAACCGGGGATGGAGATGGAGGTCGGGTTGGAGACCGAGGAGGATCAGAGCAAGAAGATTGTACGCTGGGAGAAGTTTTTGCCTCGGACGGTGCTTACAGTATTACTCGTTGAAGCGGATGATTCTACTCGTCATATTATCGCGGCCCTTCTCCGGAAATGCAGTTACAAAGTTGCTGCGGTTCCTGATGGATTAAAGGCATGGGAGACGCTGAAGCGGAAAGCTTCTGGAATAGATCTCATATTAACAGAAGTGGAGTTGCCATCAATATCTGGATTTGCACTTCTTACTTTGATCATGGAACATGATATATGCAAGAACATTCCTGTCATAATGATGTCTACTCATGATTCAGTTAGTTTGTCAGTGAAATGCATCTTGAACGGTGCAGCTGATTTTCTCATAAAACCTGTTCGGAGGAATGAGCTGAGGAACTTGTGGCAACATGTATGGAGAAGACATGAGAAAAAACTGGAAACAACTTCTGAAAACAATGCTGCCAGCAATAATTCTAGTGGTTCTGTGGCTTCCACACAGAAAAATAATGGGCGACCTGAGAAAGGGAGTGAGGCCCAAAGCACTTGTACATCGCCATTTTTGGAAGCTGAGAGTGCATACATGCAAAATATGCAGGATACATCCCATCTGAAGAGTTCTTCGAATTTGAGCAACATTGACACAGGGCAGAATGAAGACTCAACCATATTGGGTTTGGAAAAGCAATCAGTTAAGCTTAACAATGAAACTGGAGATAAGTCAGGGGCATTGTTATCACCGGCTGCAAAGTCTGACAAGAATTTTAAATCGACAGATTTTGGGCAGGATCAAGGACATGATTGTACTGAAAAGGAGAATCAAGTTGAAGTTCTTAGAGCAGAGTCAAGCAGAGAAAATCATAACATGGATACAGAGATTCATGAATGCAACAATGAACTGGTAGAACCCTCTAGAGGGGCTATTGATTTGATTGCTGCATTCAATAATCTACCAGTAAAGTATGATGAAAGCTGTAATCTCAGTGGTAATGGTGCAAAGAAGTTTGATTTTGATCCACGATTGGAGCTTTCTCTAAGACCTGATTTTCCTAGAAGCTCACCTAAACAAACAATTGATGAAAAACAGGCCTTGAACCATTCAAAGGCTTCTGCCTTTTCTTGGTATAGCGGATGCAAGTTCCCATCACCATCTGGAAGCTCTGCTAAAGCAGGTGGCCACAATGGGAATTCTCATGAAGCCACTAAATTATCTATAAATATTGTTGACACTTCCCATCAATATGGTGGCACGAATCATAGTTCAGAGAATATGGCGACCCTTGCCATTGGTCAATCCGGTCAAGTTGAAATACAATTGCCAAACAGCCAACTTGGACCATTTCCTGCTACTGGTGGTGCTTCTGACAACAAGCCTACTGAATCCGAATATTTTTTTCCACCTATGCTTCAAACACAATCTGATGTTCATTCCACATGGAGTCCAAAACCTAACTTCCCAAAAGAGAGTTCTCCTTCTCCCATTCTCGCGAGTAACTCTTTCCAGTCCAATCCTGAGAGTCACAATTCTGAACAACGTTGTCACTGTTCTGATGATGCCACCTATACTTCTCGTGATAAAACTGCAAATGAAAAAGGCAATTTGGATCCTGCTAGGCAACATTCTTCTGCTGTTGATCAGAGCACAAGCAATGCCTCTTACCATGACACTGCAAATCAGAACAGTAAGGATCATAATAATACTAGTGCACATAAAATCGCATGCAAAATTGATGGAAATGCTTCTTCAGCTGCAGTAGTTGAGAGCAACACTGAAAATTACGGCGACAGTGGCCATCATAATAATGATGGATTTAGAGGGACAGATTCTTATTGTCCCAGCAACAGAGAAGCTGCTCTAACAAAGTTTCGGATGAAGCGGAAAGAGAGGTGCTATGAGAAAAAGGTCCGATATCTAAGCAGGAAAAGACTAGCAGAGCAGCGTCCGCGGGTTAAAGGGCAGTTTGTACGCCAAGTACATAACAACGATCATCCTGTTGCTGATGTTGATGTTGGTTCCTGA 2082 0.426 MGEVVVRTDEPGMEMEVGLETEEDQSKKIVRWEKFLPRTVLTVLLVEADDSTRHIIAALLRKCSYKVAAVPDGLKAWETLKRKASGIDLILTEVELPSISGFALLTLIMEHDICKNIPVIMMSTHDSVSLSVKCILNGAADFLIKPVRRNELRNLWQHVWRRHEKKLETTSENNAASNNSSGSVASTQKNNGRPEKGSEAQSTCTSPFLEAESAYMQNMQDTSHLKSSSNLSNIDTGQNEDSTILGLEKQSVKLNNETGDKSGALLSPAAKSDKNFKSTDFGQDQGHDCTEKENQVEVLRAESSRENHNMDTEIHECNNELVEPSRGAIDLIAAFNNLPVKYDESCNLSGNGAKKFDFDPRLELSLRPDFPRSSPKQTIDEKQALNHSKASAFSWYSGCKFPSPSGSSAKAGGHNGNSHEATKLSINIVDTSHQYGGTNHSSENMATLAIGQSGQVEIQLPNSQLGPFPATGGASDNKPTESEYFFPPMLQTQSDVHSTWSPKPNFPKESSPSPILASNSFQSNPESHNSEQRCHCSDDATYTSRDKTANEKGNLDPARQHSSAVDQSTSNASYHDTANQNSKDHNNTSAHKIACKIDGNASSAAVVESNTENYGDSGHHNNDGFRGTDSYCPSNREAALTKFRMKRKERCYEKKVRYLSRKRLAEQRPRVKGQFVRQVHNNDHPVADVDVGS 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g2069 693 SMART REC_2 41 156 IPR001789 GO:0000160
Alju05g2069 693 Gene3D - 41 243 - -
Alju05g2069 693 Pfam Response regulator receiver domain 43 154 IPR001789 GO:0000160
Alju05g2069 693 ProSiteProfiles CCT domain profile. 636 678 IPR010402 GO:0005515
Alju05g2069 693 MobiDBLite consensus disorder prediction 531 554 - -
Alju05g2069 693 MobiDBLite consensus disorder prediction 461 587 - -
Alju05g2069 693 MobiDBLite consensus disorder prediction 167 204 - -
Alju05g2069 693 MobiDBLite consensus disorder prediction 461 478 - -
Alju05g2069 693 CDD psREC_PRR 43 146 - -
Alju05g2069 693 MobiDBLite consensus disorder prediction 171 204 - -
Alju05g2069 693 PANTHER TWO-COMPONENT RESPONSE REGULATOR 42 344 IPR045279 GO:0009736
Alju05g2069 693 Pfam CCT motif 636 678 IPR010402 GO:0005515
Alju05g2069 693 ProSiteProfiles Response regulatory domain profile. 42 160 IPR001789 GO:0000160
Alju05g2069 693 SUPERFAMILY CheY-like 41 172 IPR011006 -
Alju05g2069 693 MobiDBLite consensus disorder prediction 486 530 - -
Alju05g2069 693 MobiDBLite consensus disorder prediction 555 587 - -
Alju05g2069 693 MobiDBLite consensus disorder prediction 611 631 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g2069 Alju-ChrAlju05 53872981 53877903 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g2069 636 685 Response Regulator Gene Family AT5G24470 82.000 8.16e-20 91.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Alju05g2069 Response_reg 5.1e-21 CL0304