Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g2063 ATGGCTCAATCACAACAATCTCATTTTCATTCCATGCCTCCTCACAACGAAGAGAAGAAGCAACCAACAAAAATAGATGATGACGTTGAAGAAGAAGAAGGCTTCTCCTACGCGATGCAGCTCGCCACTTCTACTGCGATTTCCATGGCGATGCAAACGGCGGTAGAGCTCGGCGTCTTCGACGTCATTCACAGAGCTGGTCACGATGCCAGGATCTCCGCCGCCGAGATCGCGACAGAGATTTCTTGCAAGAACTCCGAAGCGCCTTCCGCCATCGATCGTCTCCTCCGGCTCCTAGTGTCTCATTCTGTTCTTTCCTGCTCTGTCGTCGCCGACGAGGATCGAGGGCCAGGGTGTTTCCGACGATTGTACGGCCTCTCTCCAGCGGCCAAATTCTTTGTGAGAAATGAGGATGGAGTGTCGTTGGGCCCTTTAACTGCAGTGGTTCAAGATAATGTCTTCCTTGATAGCTGGCGAGAATTGAAGAATGCAATATGTGAAGGTGGAATAGCGTTCAATAGGGTACATGGATCACATGCCTTTGAGTATCCGAGATTGGATTCAAGGTTTAACGATATGTTCAACAAGGCCATGGTGAATTCAACCACTCTGGTTGTGACTAAGATTCTTGAATCCTACAAAGGTTTTGAGGATATCACTAGACTCGTCGATGTTGGTGGAGGTCTTGGTGTTGCTCTAAGCTTGGTCACTTCCAAATATCCCCACATTCAAGGAATCAATTTCGACTTGCCTCATGTCACCCAACATTGTCCTCCTTATCCTAGAGTGGAACACGTGGGAGGAGATATGTTTGAAAGTGTGCCTCAAGGAGATGCCATCTTCATGAAGTGGATACTTCATGATTGGAGCGATGAATGGTGCTTGAAGCTGTTAAAGAACTGTCATGAAGCCATTCCTGAAGACGGAAAAGTGATTGTGGTGGACGCAGTTTTGCCCATTGTTCCAGAGAATTCTGCTGCTGCAAAAAGCACTTCCCAACTTGATCTGGTTATGATGACCCAAAACCCAGGTGGCAAAGAGAGAAGTGATCAAGAGTTTATGGATTTGGCCACATCAGCTGGGTTTAGAGGCATTCGATATGAATGTTTTGTTCGTAACTTTTGGATCATGGAATTCTTCAAATAG 1146 0.4668 MAQSQQSHFHSMPPHNEEKKQPTKIDDDVEEEEGFSYAMQLATSTAISMAMQTAVELGVFDVIHRAGHDARISAAEIATEISCKNSEAPSAIDRLLRLLVSHSVLSCSVVADEDRGPGCFRRLYGLSPAAKFFVRNEDGVSLGPLTAVVQDNVFLDSWRELKNAICEGGIAFNRVHGSHAFEYPRLDSRFNDMFNKAMVNSTTLVVTKILESYKGFEDITRLVDVGGGLGVALSLVTSKYPHIQGINFDLPHVTQHCPPYPRVEHVGGDMFESVPQGDAIFMKWILHDWSDEWCLKLLKNCHEAIPEDGKVIVVDAVLPIVPENSAAAKSTSQLDLVMMTQNPGGKERSDQEFMDLATSAGFRGIRYECFVRNFWIMEFFK 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g2063 381 FunFam Caffeic acid 3-O-methyltransferase 14 133 - -
Alju05g2063 381 SUPERFAMILY "Winged helix" DNA-binding domain 30 137 IPR036390 -
Alju05g2063 381 PIRSF O-mtase 15 381 IPR016461 GO:0008168
Alju05g2063 381 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 39 381 IPR016461 GO:0008168
Alju05g2063 381 Pfam Dimerisation domain 49 100 IPR012967 GO:0046983
Alju05g2063 381 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 139 379 IPR029063 -
Alju05g2063 381 Gene3D Vaccinia Virus protein VP39 134 381 IPR029063 -
Alju05g2063 381 PANTHER O-METHYLTRANSFERASE 38 366 IPR016461 GO:0008168
Alju05g2063 381 Gene3D - 15 133 IPR036388 -
Alju05g2063 381 MobiDBLite consensus disorder prediction 12 27 - -
Alju05g2063 381 FunFam Caffeic acid O-methyltransferase 134 381 - -
Alju05g2063 381 CDD AdoMet_MTases 221 318 - -
Alju05g2063 381 MobiDBLite consensus disorder prediction 1 28 - -
Alju05g2063 381 Pfam O-methyltransferase domain 158 363 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g2063 Alju-ChrAlju05 53717013 53792295 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g2063 17 381 Monolignol Biosynthesis Gene Families AT5G54160 48.767 6.28e-133 383