Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g2059 ATGGACGCATACTCCTCTGGAGGGGAAGTGATATTTAAGACAAGAAAACCTTATACAATCACAAAGCAAAGGGAAAGATGGACTGAGGAGGAGCATAATAGGTTTCTAGAAGCCTTAAAGCTCTATGGGAGAGCATGGCAGCGCATCGAAGAGCATATAGGAACAAAGACTGCTGTGCAAATCAGGAGCCATGCGCAGAAATTCTTTTCAAAGCTGGAGAAAGAGGCTCTTGAAAAGCGTGTTCCAATAGGACAAGCTCTTGACATAGACATCCCTCCTCCAAGGCCAAAAAGAAAGCCAACTAATCCTTATCCTCGGAAGATCAGTACTGGCTCTCCAGCATTACATAATGGAACAAAAGACGGCAAACTAACTTCTGTTTCACCTTCGCATGGTAAACGTGCACTGGACTTGGAGAGAGAACCACCTCCAAAGAAATCTAATGGAGATGAAAGACCATTAAGTGTTAATGAAAATAAGGATGAGAACTGCTCAAGAGTATTTGCTATCCCACAGGAGCCACCCTGTTCCTCTATATCTCCAGCAAAAAACAGATCAATTTCACTGTCAGTGCCACTGGGAAACTCATGCATTTTAAGGGAGTTCATACCTTCAGTAAGAGTGGGAATTACTCGAGATGAAACGAATGAATCTTCTGTCACCATTGAACTTGAAAATCAGAATTGCAAGATAGATGATGGAAAAAAACTACTACAGACAAAAGCCTCTAAATTGGAGGGTTCTGATGCTTCAGGTGCAAAATGGGTTCAAAGTCAGAAAACAGATGGTCTCAATTGTGCATTAACAAAAGATGGGATACAAGACAATCAGAATTACCCAAGGCATGTCCCAGGGCATGGTATTGATGGGAACCAGGGAACAAGTACACAAAACCCTCCCCAAGATATGCTATTACGAGACTCTATATTTCAGACTGTGGGAGAGGTTAGTGGGCAACCTAATATTTTCACAGATTCAGCTGCATCAAACACAAGTGAAAGTAAGAATAACACGCCTCGATCTTCTATTCATCAATTATTTCCTGCTTATCCTCCCTTCACACCAGTTCTCTGTAGTCAAGACCCTTGCCGTTCATTTTTTCCCATGTCCCCCACATTCTCAAGTCTCATTGTCTCCGCCCTAATGCAAAATCCTGCAGCCCATGCTGCAGCTAGTTTTGCTGCTACATTTTGGCCCCACACAAATGCAGAAGCTTCAGCTGATTCTCCTGCTTCCTCTCAAGGAGGTTTCACATCAAGACAAATTGGCTCTCCTCCAAGTATAGAAGCTATTGCTGCTGGTACTGTGGCTGCTGCAACCGCATGGTGGACTGCCCATGGACTGCTTCCTTTGTGTGCTCCACTCCATTCTGCTCTCTCCTCTCCTCCTGCATCTGCGGTGGTAGTTCCTTGTTCCATGAACACTGGCGAAGCGCAAGCAGCTGAAAAAGATCAGAAAGAGACTACAGTTGAGAATCCTCCTCTGCAAGATCAGATGCCAAATGGAGAATATTCAGAAGCTCTGCAAGCTCAGCATTCAGACTCCAAGTCACGAGCTGTTTCTTCATCAGATTCTAAGAGTGGAGATGCCAAGTTAACCACTTCAGCTAAGGCTGCTGAACATGACAAGAATGAAGCAATGTCTGAGCACCTTGATTCCAACAAGACCAACGGAAGAAAACCGGTTGAGCGTTCTTCATGTGGCTCCAACACAAACTCTAGTAGTGATATTGAGACAGATGCATTAGAGAAGAACGAGAAAGGGAATGAAGAGTCCTTAACACCAGATGCAAACCACTTAACAACTGACCTTAGTAATCGCCGAAGTAGGAGTTCTGGCAACCTTACTGATTCTTGGAAAGAAGTCTCTGAAGAGGGGCGACAGGCCTTTCAGGCTCTCTTCTCCAGAGAGGTTTTGCCGCAAAGCTTTTCACCACCACACTTGGAAAAGGACATTCAGAAAGACCACAAAAAGGAGCATCATGAGCAGAACACAGTTGAGAAATATGAAGACCTTGACTGCAACAAATACAGCTCTGATCAGGTAGGGGTAGAGAAGAACATGCCATTTGTAGAAAACACACAAGAACTGGGGGGACTTCTAACCATAGGGCTGGGACAAGGAAAGCTCAAGGCATGTCGAACCGGGTTTAAACCTTACAAAAGATGTTCAGTGGAGGCCAAGGAAAATAGGTTTCGTACTAGTAACCAGGGTGAAGAGGAAGGTCCCAAGAGAATACGCTTGGAGGGGGAGGCTTCAACTTGA 2265 0.4464 MDAYSSGGEVIFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEALEKRVPIGQALDIDIPPPRPKRKPTNPYPRKISTGSPALHNGTKDGKLTSVSPSHGKRALDLEREPPPKKSNGDERPLSVNENKDENCSRVFAIPQEPPCSSISPAKNRSISLSVPLGNSCILREFIPSVRVGITRDETNESSVTIELENQNCKIDDGKKLLQTKASKLEGSDASGAKWVQSQKTDGLNCALTKDGIQDNQNYPRHVPGHGIDGNQGTSTQNPPQDMLLRDSIFQTVGEVSGQPNIFTDSAASNTSESKNNTPRSSIHQLFPAYPPFTPVLCSQDPCRSFFPMSPTFSSLIVSALMQNPAAHAAASFAATFWPHTNAEASADSPASSQGGFTSRQIGSPPSIEAIAAGTVAAATAWWTAHGLLPLCAPLHSALSSPPASAVVVPCSMNTGEAQAAEKDQKETTVENPPLQDQMPNGEYSEALQAQHSDSKSRAVSSSDSKSGDAKLTTSAKAAEHDKNEAMSEHLDSNKTNGRKPVERSSCGSNTNSSSDIETDALEKNEKGNEESLTPDANHLTTDLSNRRSRSSGNLTDSWKEVSEEGRQAFQALFSREVLPQSFSPPHLEKDIQKDHKKEHHEQNTVEKYEDLDCNKYSSDQVGVEKNMPFVENTQELGGLLTIGLGQGKLKACRTGFKPYKRCSVEAKENRFRTSNQGEEEGPKRIRLEGEAST 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g2059 754 SMART sant 23 71 IPR001005 -
Alju05g2059 754 MobiDBLite consensus disorder prediction 594 619 - -
Alju05g2059 754 Pfam Myb-like DNA-binding domain 24 67 IPR001005 -
Alju05g2059 754 MobiDBLite consensus disorder prediction 86 159 - -
Alju05g2059 754 MobiDBLite consensus disorder prediction 133 159 - -
Alju05g2059 754 MobiDBLite consensus disorder prediction 579 593 - -
Alju05g2059 754 MobiDBLite consensus disorder prediction 729 754 - -
Alju05g2059 754 Gene3D - 26 73 - -
Alju05g2059 754 MobiDBLite consensus disorder prediction 280 299 - -
Alju05g2059 754 ProSiteProfiles Myb-like domain profile. 19 69 IPR001005 -
Alju05g2059 754 SUPERFAMILY Homeodomain-like 18 74 IPR009057 -
Alju05g2059 754 MobiDBLite consensus disorder prediction 320 342 - -
Alju05g2059 754 MobiDBLite consensus disorder prediction 105 126 - -
Alju05g2059 754 NCBIfam myb-like DNA-binding domain, SHAQKYF class 22 71 IPR006447 GO:0003677
Alju05g2059 754 PANTHER SWI/SNF COMPLEX-RELATED 12 638 - -
Alju05g2059 754 MobiDBLite consensus disorder prediction 491 532 - -
Alju05g2059 754 MobiDBLite consensus disorder prediction 648 665 - -
Alju05g2059 754 ProSiteProfiles SANT domain profile. 22 73 IPR017884 -
Alju05g2059 754 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 19 73 IPR017930 -
Alju05g2059 754 MobiDBLite consensus disorder prediction 637 665 - -
Alju05g2059 754 MobiDBLite consensus disorder prediction 535 559 - -
Alju05g2059 754 MobiDBLite consensus disorder prediction 478 622 - -
Alju05g2059 754 CDD SANT 26 69 IPR001005 -
Alju05g2059 754 FunFam protein REVEILLE 6 isoform X1 26 74 - -
Alju05g2059 754 MobiDBLite consensus disorder prediction 560 578 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g2059 Alju-ChrAlju05 53605133 53614708 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Alju05g2059 Myb_DNA-binding 2.7e-13 CL0123