Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g2054 ATGAAGGGAGGGAAGGGTCGTTTGGTTGCAAAATATGGGGGGAGGACCCTCCAGTCTCTGTATATAAGGAGCAATGCTTCAAGTGAAGAATTCAAGTCCTCCTCTTTCAGTACTACGATCACTCCCTCTTTTTCACTCTCAAGCATCTTCTTCTCCCTAAAATTCTCTGCTTTCCCTTTTATTATCACTGAGACAACCATGGCCGATCCGACGACGATGAAGAGACGCATGCCTGTAGGATACAGATTCTGTCCGACCGAGGAACAGCTTGTCGCTTATTACCTCCCCCACAAATTGATGTCTCATGATCCTCCCAATGGTAAAACCATCCCTGAGTTTGACGTTTGCAACTACGAACCTTGGGAATTACTAGCAAATTTCTCTATCCTTTCAAAGGAATATTATTTATCAAATATGAACTCAACAGTTCAAATATCTTCATACCCTGAAGTTATGGATTCAGTAATTCATACACCTTTCCAACCAAATGAAGTTATAAACTCAACGACTCAAACTTCTCTTCAACCAAGCGAAGGATATCTATCAAATGAAGATATAGACTCAATGATTCAAGTATTTGACCAGTCAACAGTTCAAACATCTTCACACCCTGAAGTTATGGATTCACTAGTTCATACACCTTTCCAACTAAATGAAGTTATAAACTCAATGACTCAAACTTCTCTTCAACCAAACGGAGGATATTTGTCAAATGAAGATACAGACTCAATAATTCAAACATTTTACCAATCAAATGGGGTTTTACCACCAGAACTACTCAAGTCAATCATGGACACACCACTTGATTTTGGTTTTGATGATGAATTTTACCACGGCTAA 840 0.3917 MKGGKGRLVAKYGGRTLQSLYIRSNASSEEFKSSSFSTTITPSFSLSSIFFSLKFSAFPFIITETTMADPTTMKRRMPVGYRFCPTEEQLVAYYLPHKLMSHDPPNGKTIPEFDVCNYEPWELLANFSILSKEYYLSNMNSTVQISSYPEVMDSVIHTPFQPNEVINSTTQTSLQPSEGYLSNEDIDSMIQVFDQSTVQTSSHPEVMDSLVHTPFQLNEVINSMTQTSLQPNGGYLSNEDTDSIIQTFYQSNGVLPPELLKSIMDTPLDFGFDDEFYHG 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g2054 279 Gene3D NAC domain 86 148 IPR036093 GO:0003677|GO:0006355
Alju05g2054 279 Pfam No apical meristem (NAM) protein 78 136 IPR003441 GO:0003677|GO:0006355
Alju05g2054 279 SUPERFAMILY NAC domain 68 135 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g2054 Alju-ChrAlju05 53533133 53535822 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g2054 77 130 NAC Transcription Factor Family AT3G49530 48.148 2.88e-11 61.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Alju05g2054 NAM 1.4e-09 No_clan