Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g2053 ATGGCTCCGGCGGATCTAGCTCCGGCTGTTGGGTACAGGTTTCATCCGACCGACCAAGAGCTCGTCGGTCACTACCTCCGCCACAAATTGAAGGCTGACGATCTTTCCATTCACGACATCATCCCTGAGATTGGCGTCTGCAAGTATGAACCCTGGGATTTATTAGACTGGGCTGCTTCCGCTTCAGCAACAAATTTTGATGAATCACAATGCTTTTTCTTCAGTCCTCGCGACTATAAGTACCCTAAAAGTAATCGGTCGAACAGAACGACCTTTCGTGGCTTCTGGAAAGTAACCGGTAGAGACCGAAAAATTATAAGCAAAGACACCAACAAAGTTATTGGGAGGAAGAAGACTTTAGTTTACTATGAAGGTCGTGTTCCTCATGAAATCAGTACCAACTGGGTTATTCATGAATATCATGATGATGAGTTATCTCATAATCAGAGGACTCATGTTCTTTGTTGGATGAGGAAGGATAATAAGAAGAAAACAAAAAAAAAATCTCATCAGCTAGCTGGTGATAAAAGAAGGACAATTAATCATACAAAAAATCAAGAAAATATATGTATGAATTCAAAAGAACACTATTTTTCAAGTAGGAGTTCAATGATTCAAGTATCTTCCCAATCAAATGAAGCTATAGACTCAATGATTCAATCTATTGAATCAAATGAAGCTATAGACTCAATGATTCAAGTATCTTCTCAATCAAATGTAACTATAGATTCAATGATTCAACATGTTGAATCAAACAAATCTATAGACTCACTGATTCAAATATCTTCCTCATCAAATCAAGATGAATATTCAAGTAGTCAAATATCTTCCCAATCAAATGATATTAGCAATCCAATAAAGCAAATATCTCCTCAATCATATGAAGCCATAAATTCAGATGAATTTGGTTTCAGTTTATTTGATTCATTTGACTCGAGTGAATTTGACTTCACCTCACTCTTTCAATCTCCAAGGGAAGGAGAGCAAGGGCTATTCAGAAGTGATGGCAACATCTGA 1017 0.3727 MAPADLAPAVGYRFHPTDQELVGHYLRHKLKADDLSIHDIIPEIGVCKYEPWDLLDWAASASATNFDESQCFFFSPRDYKYPKSNRSNRTTFRGFWKVTGRDRKIISKDTNKVIGRKKTLVYYEGRVPHEISTNWVIHEYHDDELSHNQRTHVLCWMRKDNKKKTKKKSHQLAGDKRRTINHTKNQENICMNSKEHYFSSRSSMIQVSSQSNEAIDSMIQSIESNEAIDSMIQVSSQSNVTIDSMIQHVESNKSIDSLIQISSSSNQDEYSSSQISSQSNDISNPIKQISPQSYEAINSDEFGFSLFDSFDSSEFDFTSLFQSPREGEQGLFRSDGNI 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g2053 338 Gene3D NAC domain 17 167 IPR036093 GO:0003677|GO:0006355
Alju05g2053 338 MobiDBLite consensus disorder prediction 265 286 - -
Alju05g2053 338 Pfam No apical meristem (NAM) protein 10 141 IPR003441 GO:0003677|GO:0006355
Alju05g2053 338 ProSiteProfiles NAC domain profile. 8 160 IPR003441 GO:0003677|GO:0006355
Alju05g2053 338 SUPERFAMILY NAC domain 9 159 IPR036093 GO:0003677|GO:0006355
Alju05g2053 338 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 11 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g2053 Alju-ChrAlju05 53527496 53529138 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g2053 1 161 NAC Transcription Factor Family AT3G17730 46.386 1.75e-43 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Alju05g2053 NAM 1.7e-31 No_clan