Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g2049 ATGGCTGAGACAACCATGGCTCCGGCGGATCTAGCTCCGGCGGAGAGACCTATGCCTGTTGGGTACAGGTTTCGTCCGACCGACCAAGAGCTCGTCGGCCACTACCTCCGGCACAAATTGAAGGCTGACGATCTTTCCATTCACGACACCATCCCTGAGATCAGCGTCTGCAAGTATGAACCCTGGGATTTATTAGCTCGTGCTGCTTCCGCTTCAGCAACCAAGTTTGATGAATCACAATGCTTTTTCTTCAGTCCTCGCGACTATAAGTACTCTAACAGTAATCGGTCGAACAGAGCAACCTTGCGGGGCTTCTGGAAAGTAACCGGTAGAGACCGAAAAATCACAAGTAAAGACGCCAACAAACTCATTGGAACCAAAAAGACCTTAGTTTACTATGAAGGTCGTGTTACTCCTGGAATTAAAACCAACTGGTTTATTCATGAGTATCATGATGCCCAGTTATCTCCTAATCAGAGGACTTATGTTCTATGTTGGTTAAGGAAGGATAATAAAAAGAAAATAAAAGAAAGAAGTCGTCAACTAGCTGATGACGAGAAAAGGACAATTAACCATATAATACCTGAGTATGAACCAGAAGCAGATATATGTATGAATCCAGAAGAACACTATTTCTCAAATAAGAGTTCGGTGATTCAAACATCTTTCCAATCAAATGAAGCTACAGACTCAATGATTCAAATGCCTTTTGAATCAAATGAAGTTGTAGAATCAATGATTCAAATATCTTCCCAATCTAATAAAATTATTAATCCAAAAAAACAAATATCTCCTCAATCATATGTAGCCACAGGCACAATGATTGAAAAACCTTTCCTGGCAGATGAAGTATTAACCTCAAGTATTCATATGCCACTATCTGAATCAAATTCTACTAGAACAGTAGACTTAATGATTCAAACACCTCCATTTGAATCAAATTCTACAAGAGCAATAGACTCAATGATTCAAACACCACTATTTGAATCAAATTCTACTATAGCAGTAGATTCAATGATTCAAATAACTTTCAAATCAGATGAAGCATTAGCCTCAACTATTCATACACTATCGGATGAATCAGCTGCTATTATAGCTGTAGATTCAACAATTCAAACATCTATCAAACCAACCATCAAACAAGATGAAACATTAAACTCAATGATTCATATAAAGTCATCTGAACCAAATTTTGTTGTTGAAACATCATTTGATGCAGGTGAATCTGGCTTCAGCTTATTTGACTCAGGTGAATTTGACTTCACCTACTTGCAATCTCCAAGTCTAGATGAGCGAGGGCCATTCGAAATGATTCAAACACCATTATTTGGATCAAATTCTACTATAGCAGTAGATTCAATGATTCAAATACCTTTCAAATCAGATGAAGCATTAGCCTCAACTATTCATACACTATCAGATGAATCAGCTGCTATTATAGCTGTAGATTCAACAATTCAAACATCTATCAAACCAACCATCAAACAAGATGAAACATTAAACTCAATGATTCATATAAAGTCATCTGAACCAAATTTTGTTGTTGAAACATCATTTGATGCAGGTGAATCTGGCTTCAGCTTATTTGACTCAGGTGAATTTGACTTCACCTACTTGCAATCTCCAAGTCTAGATGAGCGAGGGCCATTCGAAATGATTCAAACACCATTATTTGGATCAAATTCTACTATAGCAGTAGATTCAATGATTCAAATACCTTTCAAATCAGATGAAGCATTAGCCTCAACTATTCATACACTATCAGATGAATCAGCTGCTATTATAGCTGTAGATTCAACAATTCAAACATCTATCAAACCAACCATCCAACAAGATGAAACATTAACCTCAATGATTCATATACAGTCATCTGAACCAAATTTTGTTGTTGAAACATCATTTGATGCAGGTGAATCTGGCTTCAGCTTATTTGACTTCACCTACCAGCAATCTCCAAATCTAGATGAGCGAGGGCTATTCGAAATGGTGGCCACATCTGATGTGCCTTGGCATGAAGCATTGGAAACCATATATATATAA 2040 0.3725 MAETTMAPADLAPAERPMPVGYRFRPTDQELVGHYLRHKLKADDLSIHDTIPEISVCKYEPWDLLARAASASATKFDESQCFFFSPRDYKYSNSNRSNRATLRGFWKVTGRDRKITSKDANKLIGTKKTLVYYEGRVTPGIKTNWFIHEYHDAQLSPNQRTYVLCWLRKDNKKKIKERSRQLADDEKRTINHIIPEYEPEADICMNPEEHYFSNKSSVIQTSFQSNEATDSMIQMPFESNEVVESMIQISSQSNKIINPKKQISPQSYVATGTMIEKPFLADEVLTSSIHMPLSESNSTRTVDLMIQTPPFESNSTRAIDSMIQTPLFESNSTIAVDSMIQITFKSDEALASTIHTLSDESAAIIAVDSTIQTSIKPTIKQDETLNSMIHIKSSEPNFVVETSFDAGESGFSLFDSGEFDFTYLQSPSLDERGPFEMIQTPLFGSNSTIAVDSMIQIPFKSDEALASTIHTLSDESAAIIAVDSTIQTSIKPTIKQDETLNSMIHIKSSEPNFVVETSFDAGESGFSLFDSGEFDFTYLQSPSLDERGPFEMIQTPLFGSNSTIAVDSMIQIPFKSDEALASTIHTLSDESAAIIAVDSTIQTSIKPTIQQDETLTSMIHIQSSEPNFVVETSFDAGESGFSLFDFTYQQSPNLDERGLFEMVATSDVPWHEALETIYI 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g2049 679 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 17 243 - -
Alju05g2049 679 SUPERFAMILY NAC domain 12 169 IPR036093 GO:0003677|GO:0006355
Alju05g2049 679 Pfam No apical meristem (NAM) protein 19 151 IPR003441 GO:0003677|GO:0006355
Alju05g2049 679 ProSiteProfiles NAC domain profile. 18 170 IPR003441 GO:0003677|GO:0006355
Alju05g2049 679 Gene3D NAC domain 27 176 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g2049 Alju-ChrAlju05 53235674 53238338 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g2049 18 167 NAC Transcription Factor Family AT1G33060 52.903 6.01e-45 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Alju05g2049 NAM 7.7e-31 No_clan