Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g2045 ATGGCGAACGTAGCTCCTGTGCTGGAATTCACGCCTGTGGGGTTTAGATTCCGTCCAACGGATGAAGAGCTCGTGGATTACTACCTGACCAACAAATTGATCGGCGAAGATTTCGTTCTCCAGATTATACCTGTGATTGACGTTTGTAAGCACGAGCCCTGGGATTTACCAGCGTTCTCGTTGATCAAGTCGGACGACCAAGAATGGTTCTTCTTCAGTCCTCGCGATTACAAGTACTCTAACAGTACTCGGTCTAACAGGGCAACATTATGTGGCTTTTGGAAACCCACTGGCAAAGATAGGAACATCAAGGTTCGAGGTTCCAACGAGATCATTGGGACCAAGAAGACTCTGGTTTTCTATAGAGGTCGTGTTCCTAATGGCGTCAAGATGAACTGGGTCATCCATGAATACCACGCCGCATCATTTCCAGTCGACCAGAGGACCTTTGTTCTTTGCAAGTTAATGAAGAAACTTGAGAAAGCAGAAGGGAGAACCGGTGATGAGGGGGGGCCAAGTAACTTTATGCCTTCTGATTGTGAAATTGTACCAAGTGAGGGTGGAATTCCAGATGTACACTTTTTTCCCCAAAACAATCTGGAATCAATTTTTCAGACACATTACCCAGCAGATGAATGTGACATAAGCTTGTTACCTTCATCTCCAATTGTCAATGAGCAGGAATTTTCTTTCCCATTTTCCCCAAGGTTCAATTCCCATACTGGAAATGACGACAGCAGTGTAAACATGCATTTTGAAACTACTGAAGAGGAAGATAATTTTGTGAAGTCAATCCTTGTTGGTGATGAGGAGAAAGTGTACTTGAGCCAGGGAATGAGTGCTCCTATCCATTCTTTCACCCCCTCAGAACCTTTAGAGATGTACTGGGAAAGCAGTGACACAGATGCAGAAGTTGTCTCTGCACAGTATGGATATATTCCAGAGACTTCAATTAAATCTAATAAAAATGATGGTGCAAGGGAAATCCTGCTAATATCAGAGGCTAACAGCTCTGAACTTTCTTCCAACCGAGAAGCAAAACAAGAGAGAAAGGGAAGACCCTTTCAAGGTGATTTTGACTCTTCCTCTGGTGACTCAACCCCTGCTATACCACCTAAGATCAATCGGATAAAGCATGTTGGCTCTGCTTCCACTTCAAAGACATGGAAAACCCAATATCAACCAAGATCAGCTGACTCTGTGTCGATGAGAGTTGGGGCTAGAAGATCTCAAACACATAGGAAGATTTCAACCAAAGAGGCATATCATGAGGCTCAGAAAGAAACACCGGTGCATTCAAACAATAATAAGAGAGAAGCACGGGTTACTGATAAAAGGAATACTTCAAAATCCCCAAGCAGTGAATCCTCTGGTGTTAATGGGAGGAATACTTTCATTCAACTGGAGATACCATCATCAAGCCAAAACCTTAGTCCACCATCCGTATATCTTGGCAATGTTGTTATAGGGCTTTTCCTGTTTGTAGTCATTATTTGGGAAATGCTATCATGTGGGAAGTTCTGGTAG 1527 0.4329 MANVAPVLEFTPVGFRFRPTDEELVDYYLTNKLIGEDFVLQIIPVIDVCKHEPWDLPAFSLIKSDDQEWFFFSPRDYKYSNSTRSNRATLCGFWKPTGKDRNIKVRGSNEIIGTKKTLVFYRGRVPNGVKMNWVIHEYHAASFPVDQRTFVLCKLMKKLEKAEGRTGDEGGPSNFMPSDCEIVPSEGGIPDVHFFPQNNLESIFQTHYPADECDISLLPSSPIVNEQEFSFPFSPRFNSHTGNDDSSVNMHFETTEEEDNFVKSILVGDEEKVYLSQGMSAPIHSFTPSEPLEMYWESSDTDAEVVSAQYGYIPETSIKSNKNDGAREILLISEANSSELSSNREAKQERKGRPFQGDFDSSSGDSTPAIPPKINRIKHVGSASTSKTWKTQYQPRSADSVSMRVGARRSQTHRKISTKEAYHEAQKETPVHSNNNKREARVTDKRNTSKSPSSESSGVNGRNTFIQLEIPSSSQNLSPPSVYLGNVVIGLFLFVVIIWEMLSCGKFW 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g2045 508 MobiDBLite consensus disorder prediction 338 462 - -
Alju05g2045 508 Pfam No apical meristem (NAM) protein 12 139 IPR003441 GO:0003677|GO:0006355
Alju05g2045 508 Gene3D NAC domain 20 163 IPR036093 GO:0003677|GO:0006355
Alju05g2045 508 MobiDBLite consensus disorder prediction 413 448 - -
Alju05g2045 508 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 12 383 - -
Alju05g2045 508 MobiDBLite consensus disorder prediction 379 407 - -
Alju05g2045 508 SUPERFAMILY NAC domain 6 158 IPR036093 GO:0003677|GO:0006355
Alju05g2045 508 ProSiteProfiles NAC domain profile. 11 158 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g2045 Alju-ChrAlju05 53162497 53165845 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g2045 8 158 NAC Transcription Factor Family AT1G33060 58.333 1.32e-56 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Alju05g2045 NAM 4.2e-34 No_clan