Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g2038 ATGCATGCAAAACACTCGACAATCAACAACGTAGTGTATTTAGGAACCGATCATCCGGTGGTCTCTTCTCCGACTGGTACTAACAAACGGTCTCAGCTACCAAATCAATTACACCCCCTTTTCAACTCTTCATGGCCCACCTCCTCCATCATCCTCATCACCTTCTTCTTCTTCTTCTTCCCATTTTCATTTTCTTATCTTCCTCTTCTCACTACCACACTCTGCCTCTATCCTCTTTCACTGAAAAGAAGAGGTCCTCTTCTGCTTCACTTCTCTTCTGGGTTCTCTTACTTTCACTCCAAAATGGCTGAGGGACTGGATAAGCCTTTGCTTGACCCTGAGAATTTCAGTCGAGAAGGTGTTGATTTGGAACGCATACCATTAGAAGAAGTTTTTGAGCAGCTAAAAACATCGCCAAGAGGACTTTCATCTGATGACGCTGAAGCCAGACTGGAAATATTTGGCCCAAACAAGCTTGAAGAGAAGCCTGAAAATAAATTTTTGAAGTTTCTGAGTTTCATGTGGAACCCTCTATCATGGGTTATGGAAGCAGCTGCTATAATGGCAATTGTTCTTGCTAACGGTGGAGGTGAGGGTCCTGATTGGCAAGACTTCGTAGGGATTATGTGTCTACTGATCATAAACTCCACCATTAGTTTTATTGAAGAGAATAATGCTGGAAATGCAGCAGCTGCACTAATGGCTCGTTTAGCTCCGAAAACGAAGGTTCTGAGAGATGGTCAGTGGCAAGAGCAAGATGCATCTATTTTAGTACCTGGAGATATAGTCAGCATAAAGCTGGGAGATATCATTCCGGCCGATGCTCGCCTTCTCGAAGGAGACCCTCTGAAAATTGACCAGTCAGCTCTCACCGGAGAATCCTTGCCGGTAACCAAGAAGACGGGAGACGAAGTCTTTTCTGGCTCAACATGTAAGCATGGAGAGATTGAAGCTGTTGTCATTGCAACAGGAGTCAACACCTTTTTTGGAAAGGCAGCACACTTAGTTGATAGTACTATAGTTGTTGGACATTTTCAAAAGGTCCTAACCTCGATTGGGAACTTCTGCATTTGTTCTATAGCAGTAGGGATGATTATTGAAATAATAGTAATGTATCCTATAGAGAAACGTTCATATAGGGATGGAATCAACAACCTTCTTGTTCTCTTAATTGGAGGAATTCCCATAGCCATGCCAACTGTGCTATCTGTGACGCTTGCCATCGGCTCTCATCGACTTTCACAGCAGGGAGCAATCACAAAGAGAATGACAGCAATTGAAGAAATGGCAGGCATGGACGTACTATGCAGTGATAAGACTGGAACTCTTACCTTGAATCGCCTTTCTGTTGACCGAAACCTTGTAGAGGTCTTTAACAACAATATGGACAAAGATATGGTTGTCCTGCTAGCAGCCAGAGCAGCTAGGGTGGAAAATCAGGATGCCATTGATGCTGCCATCGTTAACATGCTAGCTGATCCAAGGGAGGCACGTGCAAACATCACTGAAGTTCATTTTCTACCTTTCAATCCTGTAGACAAACGTACTGCTATTACATATTATGATTCTGAAGGCAATTGGTATAGGGCTAGCAAAGGAGCTCCTGAACAGATTCTAAAAATGTGCAAAGAGAGAGATGTGATTGCTGGAAAAGTTCATGCCATCATTGACAAATATGCTGAAAGAGGCTTGCGATCTCTTGCAGTTGCTTTGCAGGAAGTTCCTGAAAAGTCCAGGGAGAGTCCCGGAGGTCCTTGGACTTTTTGTGGGCTGTTGCCCTTGTTTGATCCTCCAAGACATGATAGTGCTGAGACAATACGTAGAGCACTTAACCTCGGAGTCAATGTTAAGATGATTACAGGGGATCAGCTAGCAATTGCAAAGGAGACAGGCCGAAGACTTGGTATGGGGACAAATATGTATCCTTCTTCATCATTGTTCGGACGTGACAAGGATGAAAATGAAGCCCTCCCAGTAGACGAGCTCATTGAAAAGGCAGATGGCTTTGCTGGTGTATTTCCTGAACACAAGTATGAAATTGTGAAAATTTTACAAGAAAAGAAGCATGTAGTTGGAATGACTGGAGATGGAGTCAATGATGCACCGGCTTTAAAGAAAGCAGATATTGGGATTGCCGTGTCAGATGCAACTGATGCTGCAAGAGGTGCTGCTGATTTAGTCTTAACTGAGCCCGGCTTAAGTGTTATTGTCAGTGCCGTGTTAACGAGCCGAGCTATATTTCAGAGAATGAAAAATTATACAATATATGCAGTCTCCATAACCATTCGTATAGTGCTTGGTTTTATGCTTCTGGCATTGATTTGGGAGTATGATTTTCCACCATTCATGGTCCTGATCATCGCCATACTGAATGATGGGACAATTATGACCATATCAAAAGACCGCGTAAAGCCATCACCAACTCCAGACAGTTGGAAGCTGCCAGAGATATTTGCAACTGGAATAGTAATTGGCACTTACCTTGCTTTGGTTACTGTTCTGTTCTACTGGGCAGTAGTGGACACCACTTTCTTTGAGACACACTTCCATGTAGCCTCCTTATCCAGTGACACTCAGAAAATTTCATCCGCCGTATATCTTCAAGTCAGTATCATCAGCCAGGCTTTGATCTTTGTAACACGAAGTCAAGGATGGTCATATCTAGAGAGACCTGGAGTTCTCTTGATGTGTGCCTTTGTTGTAGCTCAGCTGGTGGCCACCTTGATAGCCGTGTATGCACATATCAGCTTTGCTAAAATTACAGGCATTGGATGGGGATGGGCTGGTGTTATATGGTTATACAGCTTGATCTTCTATATACCTTTGGACATTATCAAGTTCACAATTCGCTATATTTTGAGTGGCGAAGCCTGGAATTTGGTATTTGACAGAAAGACTGCCTTTAGTTCTAAGAAAGACTATGGGAAAGAAGATAGGAGAGCAAAGTGGATTGTTTCTCAGAGAAGCTTACAAGGATTTCCGGGCGGCACAGACTTAGAGGTGAAGAATGGACTCGCAAGACGATCTTCTTCTTTGATTGCTGAACAAGCCAGAAGACGCGCTGAAATCGCTAGGCTGGGAGAATTGCACACTTTGAGAGGACATGTAGATTCTGTTTTGAGACTGAAGAACTTGGACCGGAGTGTTCTTCAATCAGCACACACAGTGTGA 3171 0.4346 MHAKHSTINNVVYLGTDHPVVSSPTGTNKRSQLPNQLHPLFNSSWPTSSIILITFFFFFFPFSFSYLPLLTTTLCLYPLSLKRRGPLLLHFSSGFSYFHSKMAEGLDKPLLDPENFSREGVDLERIPLEEVFEQLKTSPRGLSSDDAEARLEIFGPNKLEEKPENKFLKFLSFMWNPLSWVMEAAAIMAIVLANGGGEGPDWQDFVGIMCLLIINSTISFIEENNAGNAAAALMARLAPKTKVLRDGQWQEQDASILVPGDIVSIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKKTGDEVFSGSTCKHGEIEAVVIATGVNTFFGKAAHLVDSTIVVGHFQKVLTSIGNFCICSIAVGMIIEIIVMYPIEKRSYRDGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLSVDRNLVEVFNNNMDKDMVVLLAARAARVENQDAIDAAIVNMLADPREARANITEVHFLPFNPVDKRTAITYYDSEGNWYRASKGAPEQILKMCKERDVIAGKVHAIIDKYAERGLRSLAVALQEVPEKSRESPGGPWTFCGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSSLFGRDKDENEALPVDELIEKADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVSDATDAARGAADLVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWEYDFPPFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLPEIFATGIVIGTYLALVTVLFYWAVVDTTFFETHFHVASLSSDTQKISSAVYLQVSIISQALIFVTRSQGWSYLERPGVLLMCAFVVAQLVATLIAVYAHISFAKITGIGWGWAGVIWLYSLIFYIPLDIIKFTIRYILSGEAWNLVFDRKTAFSSKKDYGKEDRRAKWIVSQRSLQGFPGGTDLEVKNGLARRSSSLIAEQARRRAEIARLGELHTLRGHVDSVLRLKNLDRSVLQSAHTV 1056
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g2038 1056 PRINTS P-type cation-transporting ATPase superfamily signature 717 729 - -
Alju05g2038 1056 PRINTS P-type cation-transporting ATPase superfamily signature 612 622 - -
Alju05g2038 1056 PRINTS P-type cation-transporting ATPase superfamily signature 286 300 - -
Alju05g2038 1056 PRINTS P-type cation-transporting ATPase superfamily signature 436 450 - -
Alju05g2038 1056 PRINTS P-type cation-transporting ATPase superfamily signature 694 713 - -
Alju05g2038 1056 PRINTS P-type cation-transporting ATPase superfamily signature 590 601 - -
Alju05g2038 1056 SFLD p-type atpase 418 746 IPR044492 -
Alju05g2038 1056 Pfam haloacid dehalogenase-like hydrolase 432 708 - -
Alju05g2038 1056 FunFam Plasma membrane ATPase 448 595 - -
Alju05g2038 1056 SUPERFAMILY Calcium ATPase, transduction domain A 239 336 IPR008250 -
Alju05g2038 1056 Pfam E1-E2 ATPase 237 415 - -
Alju05g2038 1056 SUPERFAMILY Calcium ATPase, transmembrane domain M 122 953 IPR023298 -
Alju05g2038 1056 Gene3D - 1008 1056 - -
Alju05g2038 1056 SMART Cation_ATPase_N_a_2 122 194 IPR004014 -
Alju05g2038 1056 Gene3D - 433 731 IPR023214 -
Alju05g2038 1056 NCBIfam HAD-IC family P-type ATPase 208 457 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Alju05g2038 1056 NCBIfam HAD-IC family P-type ATPase 669 775 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Alju05g2038 1056 SFLD Haloacid Dehalogenase 418 746 - -
Alju05g2038 1056 ProSitePatterns E1-E2 ATPases phosphorylation site. 438 444 IPR018303 -
Alju05g2038 1056 SUPERFAMILY HAD-like 432 741 IPR036412 -
Alju05g2038 1056 FunFam ATPase 4 plasma membrane-type 684 921 - -
Alju05g2038 1056 CDD P-type_ATPase_H 141 947 IPR006534 GO:0008553|GO:0016020|GO:0120029
Alju05g2038 1056 FunFam Plasma membrane ATPase 239 323 - -
Alju05g2038 1056 PANTHER CALCIUM-TRANSPORTING ATPASE 125 988 - -
Alju05g2038 1056 FunFam Plasma membrane ATPase 588 742 - -
Alju05g2038 1056 NCBIfam plasma-membrane proton-efflux P-type ATPase 141 912 IPR006534 GO:0008553|GO:0016020|GO:0120029
Alju05g2038 1056 Gene3D - 239 323 - -
Alju05g2038 1056 Gene3D - 201 921 - -
Alju05g2038 1056 PRINTS H+-transporting ATPase (proton pump) signature 552 570 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Alju05g2038 1056 PRINTS H+-transporting ATPase (proton pump) signature 725 750 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Alju05g2038 1056 PRINTS H+-transporting ATPase (proton pump) signature 666 682 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Alju05g2038 1056 PRINTS H+-transporting ATPase (proton pump) signature 694 710 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Alju05g2038 1056 PRINTS H+-transporting ATPase (proton pump) signature 866 887 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Alju05g2038 1056 Gene3D - 448 595 IPR023299 GO:0000166
Alju05g2038 1056 Pfam Cation transporter/ATPase, N-terminus 126 188 IPR004014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g2038 Alju-ChrAlju05 53102358 53110695 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g2038 102 1056 Primary Pumps ATPases AT1G17260 79.058 0.0 1520