Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g2037 ATGTTGGAGTATAGAAGGCTGGTAGTGCTGTTCATCAGCTTCAGTATTCTGGGTTTAATCCCCATTGTCATCAATGGCGAAACGGATCCAAGTGATGCTGCTGCTTTAAGGGTATTATTTAGCAGCATGAATTCACCATCCCAGCTAGGTTGGCCTGCAAATGGTGATGATCCATGTGTGCAGCACTGGAAGGGCATTACCTGCTTGGGCAACCGAGTCACAGAGATCAAGTTACCTGGCCTTGCACTAACTGGAACGCTGGGCTACCAGTTACAAACCTTGACATCTGTGACCAACCTAGACATGAGTAACAACAATCTTGGAGGCACTATACCATATCAACTTCCTCCAAATGTGCAGCGATTAAACCTTGCTAACAACAACTTCACTGGGGAAGTAGTTTATTCTGTTTCTGATATGACTTCTCTTACATACCTAAATCTTGGTCACAATCAACTCCAGGGCGCACTGAGTGTCAACTTTGAAAAGCTTTCTTCACTCTCCACATTGGATCTCTCTTTCAATTCTCTGTCAGGTGACCTTCCTCAGAGTATCACCTCACTTTCAAGCATCACCACCATGTATTTGCAAAACAACCAATTTACTGGCACCATTGATGTCCTTGCTGGTCTTCCTCTTGCAACTCTGAATGTGCAAAACAATCATTTTACAGGTTGGATACCAGAACAGTTGAAAAACATAAACCTACAGAAGGATGGTAATGCATGGAGCTCAGGCACTGCACCCCCACCTCCACCTGGGACACCTCCTGCAACTAGAAGTACCCGAACTCACAAAACTGGTGGCGGCAGCGGAAGGAACACCCCATCAGATGTTGGTTCCAGCGACAATGATAAAAAATCTGGTATAGGAGGTGGTGGCATTGCAGGAATAGTGATCTCCATCTTAATTGTTGGAGCAATAGTAGCATTCTTTCTGATGAAAAGGAGGAGATCCAGGAAGCCATCTTCAGATATAGAAAATGTTGACAATCAGCCCTTTGCTCCTCTTGCATCAAATGAAGTGCATGAAATGAAAGCAGTGCAAACATCCTCTGTACCTGACACAAAGACTTTTGTTCCTTCTGCCTCATTCAATCTCAAACCTCCACCTATTGATCGTCACAAATCATTTGATGAAGATGAATTTTCAAAGAAGCCTGATATTGTTAAGAAAACTGTAACAGCTCCTGCAAATGTAACATTATATTCTATAGCAGATCTACAGATTGCTACTGGCAGCTTCAGTGTGGATCAGCTTCTTGGTGAGGGATCTTTTGGACGCGTTTACCGTGCTCAATTTGATGATGGAGAGGTTCTTGCTGTGAAGAAGATAGATTCATCTGTCCTTCCTAATGATATGTCTGAAGATTTTATTGAAGTCGTTTCAAACATCTCCCAGTTGCACCATCCCAATGTAACAGAGCTCATTGGTTATTGCTCAGAGCACGGACAACATCTTCTTGTCTATGAGTTTCATAAGAATGGATCACTGCATGACTTCCTTCACTTGCCAGACGAACATAGCAAACCATTGATATGGAATTCCCGTGTCAAGATTGCTTTGGGAACTGCACGTGCTTTAGAGTACCTGCATGAAGTTTGTTCACCATCAGTCGTTCATAAAAATATTAAATCAGCCAACATATTACTCGATACGGAGCTTAATCCTCATCTTTCTGACAGTGGATTGGCAAGCTATATTCCAAATGCCGACCAGGTATTAAACCAAAATGCTGGATTGGGTTACGAGGCACCTGAAGTTGGCTTGTCTGGTCAGTATACTCTGAAGAGTGATGTCTACAGCTTTGGAGTTGTCATGTTGGAGCTTCTTAGTGGACGGAAACCATTTGATAGCTCAAGGCCAAGGTCTGAGCAGTCTCTAGTTCGATGGGCAACCCCACAACTTCATGATATTGATGCATTGACTAAAATGGTTGACCCTGCAATGGAAGGTCTATACCCTGTTAAGTCTCTTTCTCGGTTTGCCGATGTTATCGCTCTTTGCGTTCAGCCGGAGCCTGAATTCCGACCACCGATGTCCGAGGTGGTTCAAGCATTGGTCCGACTGGTACAACGTGCAAACATGAGCAGGCGAACGACATTTGGATCATCTGACCAAGGAGGATCCCAACGAGGAGATAACTCAGAAGCACAAGAAATGTAA 2166 0.4386 MLEYRRLVVLFISFSILGLIPIVINGETDPSDAAALRVLFSSMNSPSQLGWPANGDDPCVQHWKGITCLGNRVTEIKLPGLALTGTLGYQLQTLTSVTNLDMSNNNLGGTIPYQLPPNVQRLNLANNNFTGEVVYSVSDMTSLTYLNLGHNQLQGALSVNFEKLSSLSTLDLSFNSLSGDLPQSITSLSSITTMYLQNNQFTGTIDVLAGLPLATLNVQNNHFTGWIPEQLKNINLQKDGNAWSSGTAPPPPPGTPPATRSTRTHKTGGGSGRNTPSDVGSSDNDKKSGIGGGGIAGIVISILIVGAIVAFFLMKRRRSRKPSSDIENVDNQPFAPLASNEVHEMKAVQTSSVPDTKTFVPSASFNLKPPPIDRHKSFDEDEFSKKPDIVKKTVTAPANVTLYSIADLQIATGSFSVDQLLGEGSFGRVYRAQFDDGEVLAVKKIDSSVLPNDMSEDFIEVVSNISQLHHPNVTELIGYCSEHGQHLLVYEFHKNGSLHDFLHLPDEHSKPLIWNSRVKIALGTARALEYLHEVCSPSVVHKNIKSANILLDTELNPHLSDSGLASYIPNADQVLNQNAGLGYEAPEVGLSGQYTLKSDVYSFGVVMLELLSGRKPFDSSRPRSEQSLVRWATPQLHDIDALTKMVDPAMEGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRANMSRRTTFGSSDQGGSQRGDNSEAQEM 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g2037 721 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 379 492 - -
Alju05g2037 721 MobiDBLite consensus disorder prediction 259 284 - -
Alju05g2037 721 CDD STKc_IRAK 421 690 - -
Alju05g2037 721 Pfam Leucine rich repeat 117 177 IPR001611 GO:0005515
Alju05g2037 721 MobiDBLite consensus disorder prediction 698 721 - -
Alju05g2037 721 ProSiteProfiles Protein kinase domain profile. 415 690 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju05g2037 721 Gene3D Ribonuclease Inhibitor 30 181 IPR032675 -
Alju05g2037 721 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 29 254 - -
Alju05g2037 721 Gene3D Transferase(Phosphotransferase) domain 1 494 708 - -
Alju05g2037 721 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 493 701 - -
Alju05g2037 721 MobiDBLite consensus disorder prediction 239 286 - -
Alju05g2037 721 Gene3D Ribonuclease Inhibitor 182 246 IPR032675 -
Alju05g2037 721 PANTHER LEUCINE RICH REPEAT KINASE 2 72 693 - -
Alju05g2037 721 Pfam Leucine rich repeat N-terminal domain 30 68 IPR013210 -
Alju05g2037 721 Pfam Protein tyrosine and serine/threonine kinase 417 687 IPR001245 GO:0004672|GO:0006468
Alju05g2037 721 PRINTS Leucine-rich repeat signature 164 177 - -
Alju05g2037 721 PRINTS Leucine-rich repeat signature 97 110 - -
Alju05g2037 721 ProSitePatterns Protein kinases ATP-binding region signature. 421 444 IPR017441 GO:0005524
Alju05g2037 721 SUPERFAMILY L domain-like 28 233 - -
Alju05g2037 721 Gene3D Phosphorylase Kinase; domain 1 378 492 - -
Alju05g2037 721 SUPERFAMILY Protein kinase-like (PK-like) 397 687 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g2037 Alju-ChrAlju05 53089696 53095767 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g2037 8 700 Strubbelig Receptor Gene Family AT1G53730 67.954 0.0 895
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Alju05g2037 PK_Tyr_Ser-Thr 7.3e-43 CL0016