Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Alju05g2030 | ATGTTCAACGTCGTCATCGTCTTCTTCTTACTGGCAGCAGCCTTCTTCTTCTTACTCATCAAACGCTTTCTTCTTCTTCTTCTTCATCATTATTCTTCTGCAGCTGCTGATGAAAGTGAATATTATTACTGTGTAGTGTGTTTAAGCCAAGTGAATAATGGAGATAAGATTAGATGCTTACCAGTATGCAACCACAGGTTCCATTCTGATTGTATCGCTCTTTGGCTCAAGAACCGTTCCACGTGTCCTCTCTGCAGATACATCATAATCACTCATAATAACGATCATTCTTTTCTTCGTTATTATCAGAACTTAAGAGCCTTTCTGATTTCTCTCTTTCAGGGTTTTTGTCATTTCCTTCAACCTAAGATCTCTCACAATTTCCACTTTGTTCATTGA | 399 | 0.381 | MFNVVIVFFLLAAAFFFLLIKRFLLLLLHHYSSAAADESEYYYCVVCLSQVNNGDKIRCLPVCNHRFHSDCIALWLKNRSTCPLCRYIIITHNNDHSFLRYYQNLRAFLISLFQGFCHFLQPKISHNFHFVH | 132 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Alju05g2030 | 132 | Pfam | Ring finger domain | 44 | 86 | IPR001841 | - | |
| Alju05g2030 | 132 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 25 | 90 | IPR013083 | - | |
| Alju05g2030 | 132 | ProSiteProfiles | Zinc finger RING-type profile. | 44 | 86 | IPR001841 | - | |
| Alju05g2030 | 132 | SUPERFAMILY | RING/U-box | 37 | 93 | - | - | |
| Alju05g2030 | 132 | SMART | ring_2 | 44 | 85 | IPR001841 | - | |
| Alju05g2030 | 132 | PANTHER | RING-H2 FINGER PROTEIN ATL51-RELATED | 38 | 90 | IPR044675 | - |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Alju05g2030 | 20 | 96 | C3H Transcription Factor Family | AT2G17450 | 38.961 | 3.72e-17 | 72.0 |