Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g2029 ATGGGTGACCGGACAGGAACAGATGTCAATTCCGGCGACTCTCCGGGATTGGAAGTAACCGGAAAGGTCATGATCATAGCTATACTTTTCCTCTTTTTCGTGATTGTTATCGTCTGTTTCCTCCATCTCTACGCCAAATGGTTCTGGTGGGCCATTGAACGAAGCAACGGCACCACCGACCACCACCACAACGGCCGCCGCCGCCGCCGCCGCTTTGTCTTCTCACCAGGACAAGATCCCGCTATCTACGGCGTCCAGCGACGTGGACTTGAACCACAAGTCCTTAGATCCTTGCCTGTATCGGTATACCGACCAGAGGATTTCAAAGATGGTCTGGAATGTGCAGTTTGTCTCAGCGAGCTTGCTGATGGAGAAAAAGCAAGGATATTGCCTAAATGCAATCATGGATTCCATGTAGAATGCATTGATATGTGGTTCCAATCACATTCTACTTGTCCAATTTGCAGGAACCTGGTCGCTTCTGAGTCTTCTGAACCCAATCACACTCTAGGTGTTCGACAAAATGTCTCAAACAGTTATAGCGAGTCGTCAGATTCTGAAAGTTCAGATTCTATGAGCGAAGCAGATTTAGAGTCTGCAAATTTCCCTACAAATGTGTTGATTTGGGGAAATCAGGCTCAAGTAAATTCTATTGGCGCAGGTCCTTCTGTTCAGGCATCGTCTTCATCATCATCATCGGCAGCAACGGATAGTTGCAGCACTAGTAACAACAACAATAGACGTAATGGAATGTTGGTGATTGATATACCAAGGGAGATGAATCCATCATCTTTAGCTTCTACTAGCAGGTGTGCTGAAGATGATTTGAAGTCACCAATGACTTCTAGACTCCAATCATTCAAGAGGATGTTAAGCATGAGGTTCAGTCCTCGAAGTCCTAGTTCCGTAGATGTGGAACAAGCAGGGAGAGGACAGAGCTAG 942 0.465 MGDRTGTDVNSGDSPGLEVTGKVMIIAILFLFFVIVIVCFLHLYAKWFWWAIERSNGTTDHHHNGRRRRRRFVFSPGQDPAIYGVQRRGLEPQVLRSLPVSVYRPEDFKDGLECAVCLSELADGEKARILPKCNHGFHVECIDMWFQSHSTCPICRNLVASESSEPNHTLGVRQNVSNSYSESSDSESSDSMSEADLESANFPTNVLIWGNQAQVNSIGAGPSVQASSSSSSSAATDSCSTSNNNNRRNGMLVIDIPREMNPSSLASTSRCAEDDLKSPMTSRLQSFKRMLSMRFSPRSPSSVDVEQAGRGQS 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g2029 313 SUPERFAMILY RING/U-box 93 161 - -
Alju05g2029 313 MobiDBLite consensus disorder prediction 262 313 - -
Alju05g2029 313 MobiDBLite consensus disorder prediction 166 197 - -
Alju05g2029 313 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 18 162 IPR044675 -
Alju05g2029 313 CDD RING-H2_EL5-like 113 156 - -
Alju05g2029 313 SMART ring_2 114 155 IPR001841 -
Alju05g2029 313 MobiDBLite consensus disorder prediction 219 249 - -
Alju05g2029 313 MobiDBLite consensus disorder prediction 262 289 - -
Alju05g2029 313 MobiDBLite consensus disorder prediction 295 313 - -
Alju05g2029 313 FunFam RING-H2 finger protein ATL3 83 161 - -
Alju05g2029 313 ProSiteProfiles Zinc finger RING-type profile. 114 156 IPR001841 -
Alju05g2029 313 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 82 161 IPR013083 -
Alju05g2029 313 Pfam Ring finger domain 113 156 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g2029 Alju-ChrAlju05 53031180 53032121 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g2029 16 292 C3H Transcription Factor Family AT1G53820 40.940 4.84e-64 202
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju05g2029 05 53031180 53032121 Alju05g2029 05 53031180 53032121 ECH