Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g2024 ATGGTCATAGAGAATCTGTTTCCCCTAGAATCCGTTTTGGAGTTTGGACTTTTCAGAGTTAAATCGAGCTACTTCCTCTTTCTTCTTTCAAAATTTCTATCACCGATGAGTAAGCTCAGGCAAGTCTTCGCCGGGATCTCAGATCCCAGCAACAACAAGAGAAACAAAAAGCTCTTTCTCGTTCTGTTCTCCACTCTTCTCCTCCTCGCCGCCGTTGTCGGCATCGTCGCCGGAGTGAACTCCCGCCAAAAATCTTCCGGCGATGAAAATTTGAATTTATCATCCCATCCTTCCCACGCCATCGTTAAATCCGCCTGCAGCACCACACTTTACCCTGAACTTTGCTACTCCGCCGTCTCCTCCGAGCCTGGATTCACCGAGAAAGTCTCTTCCCACCGCGATGTCATCGAACTGTCCTTAAACATAACGATCAGAGCCGTTGAGCACAATTTCTTCAACGTCGAGAAGCTAATCGACAAAAGAAAGGGTAGCCTCACGAAGAGGGAGAAAACCGCTCTCCATGACTGTTTAGAGACGATCGACGAAACGCTCGACGAGCTTCACACCGCTTACCAAGATCTGAAAATCTATCCGAACAAGAAAACTCTGTATCAGCACGCTGACGATCTAAAGACTCTGATTAGTGCCGCCATTACCAACCAGGTCACTTGCCTTGACGGATTCTCTCACGACGGCGCCGATAAGAAAGTCAGGGGAGCTCTGGAGAAAGGGCAGGTTCACGTGGAGCACATGTGCAGCAATGCTCTGGCGATGATTAAGAACATGACGGACACAGATGTGGCGAACTACGAGATGAAGATGGGGATTACGAAGAGCAGGAAGCTGATGGTGGCGGCGACGTCGGAAGACGGTTTTCAGTGGCCGAAGTGGATGTCGGCGGCAGACAGGCATTTGTTGCAGGTGGCACAGGTGAAGGCTGACGTGGTGGTTGCGGCGGACGGGAGCGGAAATTTTAAGACGGTGTCGGAGGCAGTGGAGGCGGCTCCGCTGAAGAGTTCGAAGAGATACGTGATTAGGATCAAAGCAGGAGTTTACAAAGAAAATGTGGAAGTTCCAAAGAAGAAGACGAATATAATGTTCTTGGGAGATGGAAGAAAGAATACTATCATTACCGGAAGCAGGAATGTTGTTGACGGAAGCACCACTTTCCATTCTGCCACAGTCGCCGTAGTGGGAGAAAGATTCTTAGCTCGTGACATAACCTTTGAAAACACGGCCGGCCATGCGAAGCACCAAGCCGTCGCCCTCCGGGCAGGTTCCGACTTCGCCGCCTTCTACCAATGCGACTTCCTCGCCTACCAGGACACCCTCTACGTCCACAACAACCGCCAGTTCTTCATCAACTGCCTCATTGCCGGCACCGTCGACTTCATCTTCGGCAACTCTGCCGCCGTGTTCCAAGACTGCGACATCCACGCCCGCCTCCCCGGATCCGGCCAGAAGAACATGATCACTGCACAGGGTCGGGTCGACCCGAACCAGAACACCGGCATCGTCATCCAGAAGTGCCGGATCGGAGCCACGTCAGATCTGGAGGAGAAGAAGAAGGACTTCAAGACCTACCTGGGCCGGCCATGGAAGGAGTATTCGAGGACAGTGATAATGCAATCGACCATATCGGACGTGATCGATCCGGTGGGATGGCACGAGTGGAATGGCGATTTCGCCTTGAACACTCTGTTTTATGGAGAGTATCAGAACAGTGGCGCCGGTGCCGGAACGGCGAACAGAGTGAAGTGGAAGGGGTACAAGGTCATAACAAGTGCTTCGGAGGCTCAAACGTTCACTGCTGCCAGCTTTATTGGTGGCTCTAACTGGTTGGGCTCCACTGGTTTCCCTTTCTCTCTCAGTCTTTAG 1878 0.5197 MVIENLFPLESVLEFGLFRVKSSYFLFLLSKFLSPMSKLRQVFAGISDPSNNKRNKKLFLVLFSTLLLLAAVVGIVAGVNSRQKSSGDENLNLSSHPSHAIVKSACSTTLYPELCYSAVSSEPGFTEKVSSHRDVIELSLNITIRAVEHNFFNVEKLIDKRKGSLTKREKTALHDCLETIDETLDELHTAYQDLKIYPNKKTLYQHADDLKTLISAAITNQVTCLDGFSHDGADKKVRGALEKGQVHVEHMCSNALAMIKNMTDTDVANYEMKMGITKSRKLMVAATSEDGFQWPKWMSAADRHLLQVAQVKADVVVAADGSGNFKTVSEAVEAAPLKSSKRYVIRIKAGVYKENVEVPKKKTNIMFLGDGRKNTIITGSRNVVDGSTTFHSATVAVVGERFLARDITFENTAGHAKHQAVALRAGSDFAAFYQCDFLAYQDTLYVHNNRQFFINCLIAGTVDFIFGNSAAVFQDCDIHARLPGSGQKNMITAQGRVDPNQNTGIVIQKCRIGATSDLEEKKKDFKTYLGRPWKEYSRTVIMQSTISDVIDPVGWHEWNGDFALNTLFYGEYQNSGAGAGTANRVKWKGYKVITSASEAQTFTAASFIGGSNWLGSTGFPFSLSL 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g2024 625 Pfam Plant invertase/pectin methylesterase inhibitor 101 258 IPR006501 GO:0004857
Alju05g2024 625 Gene3D Invertase/pectin methylesterase inhibitor family protein 98 263 IPR035513 -
Alju05g2024 625 NCBIfam pectinesterase inhibitor domain 95 262 IPR006501 GO:0004857
Alju05g2024 625 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 101 263 IPR035513 -
Alju05g2024 625 PANTHER PECTINESTERASE 67 615 - -
Alju05g2024 625 Gene3D - 308 625 IPR012334 -
Alju05g2024 625 SMART PMEI_2 97 258 IPR006501 GO:0004857
Alju05g2024 625 CDD PMEI-like_3 104 263 - -
Alju05g2024 625 ProSitePatterns Pectinesterase signature 2. 458 467 IPR033131 -
Alju05g2024 625 FunFam Pectinesterase 308 625 - -
Alju05g2024 625 Pfam Pectinesterase 314 610 IPR000070 GO:0030599|GO:0042545
Alju05g2024 625 SUPERFAMILY Pectin lyase-like 310 623 IPR011050 -
Alju05g2024 625 ProSitePatterns Pectinesterase signature 1. 339 358 IPR018040 -
Alju05g2024 625 FunFam Pectinesterase 98 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g2024 Alju-ChrAlju05 52980108 52990135 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g2024 39 625 Carbohydrate Esterase AT3G14310 69.384 0.0 815