Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1988 ATGATTGAGAGGGAGAAAGAAGAAGCTTCTGGAGAAGGCAAGTCAGAAAATATCTGTAGCAGCGGGCAATCTCAGCCGTGAGGAGGAGGGAATGACTTGTACGGGGTTCTGGGTGTGAACAAGGACTGCTCCGAATCAGAGCTCAGACATGCCTACAAGAAACTTGCTCTGAAATGGCACCCAGATCGTTGTTTGGCGTCGGGGAATTCAAAGACCATAGAAGAAGCTAAGAACAAGTTCCAGGCAATCCACCACGCCTATTCTGTGTTGTCAGACGGCAACAAAAGATTTCTGTATGACGTGGGGGTATACGAGAGCGATGACGATGACGACCAAAACGGCATGAGTGACTTCTTGAACGAAATGGTGTCAATGATGAGCCAGACAAAGCCTAATGAAAATGGTGGGGAGGAGAGCATGGAGGAGTTGCAGCAGCTATTTGAACAAATGATTGAAGCAGACAACACAAATGGAGCATCTTCAAGATATGAAGAAGGGAAAAGGAGAAAGAGGAGGAGGTAG 522 0.4713 MIEREKEEASGEGKSENICSSGQSQPXGGGNDLYGVLGVNKDCSESELRHAYKKLALKWHPDRCLASGNSKTIEEAKNKFQAIHHAYSVLSDGNKRFLYDVGVYESDDDDDQNGMSDFLNEMVSMMSQTKPNENGGEESMEELQQLFEQMIEADNTNGASSRYEEGKRRKRRR 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1988 173 CDD DnaJ 32 92 IPR001623 -
Alju05g1988 173 SUPERFAMILY Chaperone J-domain 27 103 IPR036869 -
Alju05g1988 173 MobiDBLite consensus disorder prediction 1 36 - -
Alju05g1988 173 Gene3D DnaJ domain 30 163 IPR036869 -
Alju05g1988 173 MobiDBLite consensus disorder prediction 126 173 - -
Alju05g1988 173 Pfam DnaJ domain 32 100 IPR001623 -
Alju05g1988 173 ProSiteProfiles dnaJ domain profile. 32 103 IPR001623 -
Alju05g1988 173 MobiDBLite consensus disorder prediction 14 28 - -
Alju05g1988 173 PRINTS DnaJ domain signature 75 95 IPR001623 -
Alju05g1988 173 PRINTS DnaJ domain signature 34 52 IPR001623 -
Alju05g1988 173 PRINTS DnaJ domain signature 52 67 IPR001623 -
Alju05g1988 173 PANTHER PUTATIVE, EXPRESSED-RELATED 30 159 - -
Alju05g1988 173 SMART dnaj_3 31 95 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1988 Alju-ChrAlju05 52569146 52580567 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1988 34 100 C2H2 Transcription Factor Family AT1G74250 47.059 2.40e-12 62.4