Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1983 ATGGCCGGTTTTTCCTTTGAAACAGACTACAACTCCTCAAGTCAACACTATCCCACACGACGTTACCCGTCAACTCCGGTGAGTTCTCGCAATGCTTCTCGGTCTTTCACGGCTGCGTCGAGCTCTCGGGGAAACCACAATCTTGGACTTGGCCGCCGGAACAGGGCTCCGGCGATTCCCATTACCTCCGACGACGACCGTTCATGGCAGACAGAAGTTTCATGGCAATTTGAACCCACCGGGTGGCGAGAGTACGGTAGCAGAAACTTGGGCTCGATTTTCATTCCTTGGGCCTCAAGCCCAGCCCAATCAGATCGGAGCCGGGTTTGCTATCGGTCCGCCAAAGATTATTACCTTTCACGAACGAGCGGGTTCTACAGAGGAAACCGTTTTGCCGCGAACTCAGATTTTGAAGCTTCAGGCCATGTCATTCACTCTGGAAGAGTCGAGCTTCAGAGCTTCGTCGCCGGCGAGAATGGCGATCAGAATAGCAAGTCTTATAGTGGACTTTCGAGATTGGATGTTATCAAAGAAGGAATTATTGGTCCTAGAAAGGGGAAGAGTAGTCCCTTGGCGGGAGAAGATGAACTTAGTTTTATGTCTTTTAGTGTTGGTCAAGATCCAGAACTGTCATATACGAAAGATGATAGTTATAGTGGTCATGGGCAGATAGTACCGGTGCATTTCAGCCACGGCGACGGCGGATATAATCATAATGGGATCGACAAGTTTTCTGGGTTTCGTGAAGATGATGATGAGGAGGATATGGATTATTATGATGATGAATTGGATCCTCCAAAAGCTGTTGGGTTGTTCAGCTTGTTTCGGTACTCAACAAAGTGGGATTTAGTGCTTGTGTTTTTGGGTTGCTTGGGGGCTCTCATAAATGGAGGTTCACTTCCTTGGTATTCTTTTCTCTTTGGACAAGTTGTCAATAAGATTTCTGAACAATCAAAAGATGGTGCTAACAAAGCCCAGATAATGAAGGATATAGAGATGATATGCTTATATATGACTATGTTAGCTGTAGTGGTGATGGTTGGAGCATATATGGAGATCACATGTTGGAGGTTGGTTGGAGAGCGATCTGCTCAAAGAATAAGAAGAGAATATTTGAGAGCTGTTCTTCGTCAGGACATTAGCTTTTATGATACAGAGATCAGCACTGCTGATATTATGCATGGGATTGCAAGTGATGTTGCACAAATTCAAGAAGTTATGGGAGATAAGATGGCTCACTTCATTCATCATTTATGCACATTCATAACTGGGTATGTAGTTGGGTTTGCAAGGTCATGGAAAATCGCTCTGGTGGTCCTCTCAGTCACCCCAGTGACCATGTTCTGTGGGATAGCTTACAAGGGTATTTATGGTGGTTTATCAGCAAAAGAGGAGGCTTCTTATAGAATGGCTGGTAGCATTGCAGAGCAGGCCATCAGTTCAATTAGGACAGTTTTTTCTTTTGTTGCTGAAAGCCAGATAGCTACAAAGTATTCTGACCTGCTGAAAAATTCAGTCCCAGTTGGGGTCAAAATTGGTTTTGCTAAGGGTGCAGGCATGGGAGTCATCTATTTAGTAACATACTCAACATGGGCCTTGGCTTTCTGGTATGGCTCTATCTTAATTGCCAAGGGAGAGATTGATGGAGGTCGGGCCATTGCCTGTTTCTTTGGAGTCATGGTAGGGGGAAGAGGCTTGGCATTGGCACTTTCATATTTTGCGCAGTTTGCACAAGGCATTGTTGCAGCAAGCCGAGTATTTGAAATCATAGAGAGAGTCCCTGAGATTGATCCTTACAGCTCTGAGGGAAGGAGGCTCTCTAATGTTCGTGGAAGGATTGAGTTCAAAAGTGTTATCTTTGCATACCCAGCTCGTCCTGATGCTTTAATCCTTAATTCCCTTAAACTAGTTATTCCTTCTTTAAGAACTACAGCACTTGTTGGTGCTAGTGGAGGGGGCAAGTCTACCATTTTTGCGCTAGTAGAGAGGTTTTATGACCCTATTGAAGGGATAATAACCTTAGATGGTCATGATTTGAGGACACTGCAAGTCAAGTGGCTAAGAGATCAAATAGGAATGGTGGGTCAAGAACCGATTCTTTTTGCGACAACCATTCTGGAAAATGTGATGATGGGGAAGGATAATGTCACCAAGAAAGAAGCAATTGCAGCTTGCATTGCGGCTGATGCCCACAACTTCATCTCTGGCCTACCCCTCGGTTATGACACTCAGGTTGGAGCTAAGGGTACCCAACTCTCTGGGGGTCAAAAGCAGAGAATTGCATTGGCTCGAGCCATTATCAAAGATCCTAAAATCCTTCTATTGGATGAACCTACCAGTGCTCTTGATGCTGAGTCAGAGTCTGTGGTACAACAGGCTATTGACAAGATTTCTGCTGGACGAACAACCATTGTCATTGCTCACAGGATAGCAACAGTAAAGAATGCCCATACTATTGTGGTTCTTGAAAATGGTTCTGTGACTGAGATTGGTGATCATCGACAGCTTATGGGAAAGGCAGGTGCCTACTATAACCTTGTCATGCTTGCTACGGAAGCCACATCAAAACCAGTGTCTGACAGCATACAAAAGGTCAATGATTTTTCTGTCCATGAGAACTCAGTTCCTGATGTAACAAGATCAACAAATACTGTGGATATCTCAAGGTTCAAGTTCTTAAAATCCATTCAAGATGAAAAACAAGCCGATATGGAAGATGAGCAACAGAAGAAGCCCAGAAATTTTCAACTTTCTGAGATATGGAAACTGCAAAAACCAGAGTTTATGACTCTGTTTTCAGGATTTGTTCTGGGTATGCTTGCTGGTTCTTTTCTCTCCATTTTTCCGTTGATTCTAGGCATAGCCCTTGAAGTATACTTTAAACACGACACAGAAACAATGAAAAAAGATATTAACCATCTATGTTTAGTTCTTGTTGGGCTGGGGTTTGGTTGCATAATCTCTCTGACAGGACAGCAAGGTTTGTGTGGTTGGGCTGGAACTAAGCTCACAATGAGGATTAGAGACCTCCTTTTTCAATCCATACTAAAACAAGAACCAGGGTGGTTTGATTTTGAAGAAAATTCCACTGGAGTGCTAGTGTCAAGGCTATCTATTGACTGTATTAGTTTTCGATCAGTGCTTGGTGATCGAGTTTCTGTCCTTCTAATGGGGCTGAGCTCAGCTGCTGTTGGGCTTGGGGTGTGCTTCACATTTGATTATAGAATAACTTTGTTGGCTGCTGCACTAACTCCTTTCACTCTTGGTGCAAACTATCTAAACTTGATTATAAACCTTGGACCACGAGTCAACAACGATTCCTTTGCCAGAGCTAGTAACATCGCTTCTGGTGCAGTTTCAAACGTAAGAACAACCATTGCATTTTCTGCCCAAGAACAGATTGTCAAATCCTTTGATCGAGCATTATCAGAACCTAGGAGAAAATCAGTAAAAAGATCACAGATTCTCGGTCTAGTGCTTGGGTTCTTCCAAGGGGCCATGTATGGAGCATACACCTTAACTCTTTGGTTTGGTGCCTTCCTTGTAAAACAAGGCAAAGCAGATTTCGGGGATGTATACAAGATTTTTCTTATCCTTGTTTTGAGCTCATTTTCTGTGGGACAACTAGCTGGTTTAGCACCAGATACTTCAATGGCAGCTACTGCAATTCCAGCTGTTCTAGATATCATACACCGTAGACCATTGATAGGGAATGATGAGATTAAAGGTAAGAAACGAGAAAGATCAAAGCTGTTGAAGCTAGAATTCAAAATGGTGACATTTGCGTATCCATCTAGGCCTAATGTGGTGGTGTTGAGGAATTTCGATTTAAAAATCAAAGGTGGAAGCACAGTTGCCTTAGTAGGGGCAAGTGGATCGGGAAAATCAACAGTCATATGGTTGATACAGAGGTTCTATGATCCAAACCAGGGGCAAGTGATGATGGGTGGGTTAGATTTGAGAGACATTGATGTGAAGTGGTTGAGGAGGCATACAGCTTTGGTGGGTCAAGAACCTGCACTGTTTGCCGGGAGTATAAGGGAGAATATTGCCTTTGGAGACCCAAAAGCTTCCTGGGCTGAAATTGAAGTGGCAGCAAAGGAAGCTTACATTCACAAATTCATTAGTAGCCTTCCTCAAGGTTATGAAACTCAGGTTGGTGAGAGTGGGGTCCAGCTATCAGGCGGCCAAAAACAGAGGTTAGCAATTGCAAGGGCCATATTGAAGAAATCAAGGGTACTACTACTTGATGAAGCAAGTAGTGCGTTGGACTTGGAATCAGAGAAGCATGTCCAAGAAGCACTGAAGAATGTTAGAAGAGATACAACTACTATAATAGTAGCTCACCGTCTTTCTACGATCAGAGAGGCCGATAGCATCGCGGTGGTGAGAGAAGGGACGGTGGCTGAATATGGAAGCCATGATTCTCTCCTTGCTTTCCATCCCAATGGTTTGTATGCTAGCCTGATTCGTTCTGAAACTGAAGCCAATGCCTTTACTGGGTTTCAATAA 4512 0.4373 MAGFSFETDYNSSSQHYPTRRYPSTPVSSRNASRSFTAASSSRGNHNLGLGRRNRAPAIPITSDDDRSWQTEVSWQFEPTGWREYGSRNLGSIFIPWASSPAQSDRSRVCYRSAKDYYLSRTSGFYRGNRFAANSDFEASGHVIHSGRVELQSFVAGENGDQNSKSYSGLSRLDVIKEGIIGPRKGKSSPLAGEDELSFMSFSVGQDPELSYTKDDSYSGHGQIVPVHFSHGDGGYNHNGIDKFSGFREDDDEEDMDYYDDELDPPKAVGLFSLFRYSTKWDLVLVFLGCLGALINGGSLPWYSFLFGQVVNKISEQSKDGANKAQIMKDIEMICLYMTMLAVVVMVGAYMEITCWRLVGERSAQRIRREYLRAVLRQDISFYDTEISTADIMHGIASDVAQIQEVMGDKMAHFIHHLCTFITGYVVGFARSWKIALVVLSVTPVTMFCGIAYKGIYGGLSAKEEASYRMAGSIAEQAISSIRTVFSFVAESQIATKYSDLLKNSVPVGVKIGFAKGAGMGVIYLVTYSTWALAFWYGSILIAKGEIDGGRAIACFFGVMVGGRGLALALSYFAQFAQGIVAASRVFEIIERVPEIDPYSSEGRRLSNVRGRIEFKSVIFAYPARPDALILNSLKLVIPSLRTTALVGASGGGKSTIFALVERFYDPIEGIITLDGHDLRTLQVKWLRDQIGMVGQEPILFATTILENVMMGKDNVTKKEAIAACIAADAHNFISGLPLGYDTQVGAKGTQLSGGQKQRIALARAIIKDPKILLLDEPTSALDAESESVVQQAIDKISAGRTTIVIAHRIATVKNAHTIVVLENGSVTEIGDHRQLMGKAGAYYNLVMLATEATSKPVSDSIQKVNDFSVHENSVPDVTRSTNTVDISRFKFLKSIQDEKQADMEDEQQKKPRNFQLSEIWKLQKPEFMTLFSGFVLGMLAGSFLSIFPLILGIALEVYFKHDTETMKKDINHLCLVLVGLGFGCIISLTGQQGLCGWAGTKLTMRIRDLLFQSILKQEPGWFDFEENSTGVLVSRLSIDCISFRSVLGDRVSVLLMGLSSAAVGLGVCFTFDYRITLLAAALTPFTLGANYLNLIINLGPRVNNDSFARASNIASGAVSNVRTTIAFSAQEQIVKSFDRALSEPRRKSVKRSQILGLVLGFFQGAMYGAYTLTLWFGAFLVKQGKADFGDVYKIFLILVLSSFSVGQLAGLAPDTSMAATAIPAVLDIIHRRPLIGNDEIKGKKRERSKLLKLEFKMVTFAYPSRPNVVVLRNFDLKIKGGSTVALVGASGSGKSTVIWLIQRFYDPNQGQVMMGGLDLRDIDVKWLRRHTALVGQEPALFAGSIRENIAFGDPKASWAEIEVAAKEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRLAIARAILKKSRVLLLDEASSALDLESEKHVQEALKNVRRDTTTIIVAHRLSTIREADSIAVVREGTVAEYGSHDSLLAFHPNGLYASLIRSETEANAFTGFQ 1503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1983 1503 SUPERFAMILY ABC transporter transmembrane region 920 1234 IPR036640 GO:0005524|GO:0016020
Alju05g1983 1503 CDD ABC_6TM_Pgp_ABCB1_D1_like 287 586 - -
Alju05g1983 1503 MobiDBLite consensus disorder prediction 1 64 - -
Alju05g1983 1503 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 604 848 IPR027417 -
Alju05g1983 1503 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1254 1490 IPR003439 GO:0005524
Alju05g1983 1503 FunFam ATP-binding cassette transporter, subfamily B, member 2, group MDR/PGP protein PpABCB2 1105 1245 - -
Alju05g1983 1503 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 287 578 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju05g1983 1503 SUPERFAMILY ABC transporter transmembrane region 273 597 IPR036640 GO:0005524|GO:0016020
Alju05g1983 1503 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 613 849 IPR003439 GO:0005524
Alju05g1983 1503 Pfam ABC transporter 1272 1420 IPR003439 GO:0005524
Alju05g1983 1503 MobiDBLite consensus disorder prediction 1 48 - -
Alju05g1983 1503 CDD ABC_6TM_Pgp_ABCB1_D2_like 921 1236 - -
Alju05g1983 1503 FunFam ABC transporter B family member 1 1243 1494 - -
Alju05g1983 1503 CDD ABC_MTABC3_MDL1_MDL2 613 850 - -
Alju05g1983 1503 Pfam ABC transporter 632 780 IPR003439 GO:0005524
Alju05g1983 1503 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 934 1218 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju05g1983 1503 PANTHER ABC TRANSPORTER B FAMILY 261 849 IPR039421 -
Alju05g1983 1503 CDD ABC_MTABC3_MDL1_MDL2 1255 1491 - -
Alju05g1983 1503 ProSitePatterns ABC transporters family signature. 1393 1407 IPR017871 GO:0005524|GO:0016887
Alju05g1983 1503 Gene3D ABC transporter type 1, transmembrane domain 1220 1497 IPR036640 GO:0005524|GO:0016020
Alju05g1983 1503 FunFam ABC transporter B family member 1 603 851 - -
Alju05g1983 1503 SMART AAA_5 1281 1467 IPR003593 GO:0016887
Alju05g1983 1503 SMART AAA_5 640 841 IPR003593 GO:0016887
Alju05g1983 1503 ProSitePatterns ABC transporters family signature. 752 766 IPR017871 GO:0005524|GO:0016887
Alju05g1983 1503 Gene3D - 1243 1494 IPR027417 -
Alju05g1983 1503 Gene3D - 603 851 IPR027417 -
Alju05g1983 1503 Gene3D ABC transporter type 1, transmembrane domain 273 861 IPR036640 GO:0005524|GO:0016020
Alju05g1983 1503 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1253 1491 IPR027417 -
Alju05g1983 1503 Gene3D ABC transporter type 1, transmembrane domain 911 1219 IPR036640 GO:0005524|GO:0016020
Alju05g1983 1503 Pfam ABC transporter transmembrane region 932 1202 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju05g1983 1503 Pfam ABC transporter transmembrane region 286 562 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1983 Alju-ChrAlju05 52524230 52535712 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1983 962 1497 Calmodulin-binding Proteins AT2G36910 37.546 6.17e-102 354