Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1970 ATGTCGACCTTTTCTGATACGGCGGCGAATGGCCGGAGGGCCGGGAAGCTGGCGGAGAGGTCCAATTTCTCTCAGACTTGCAATCTCTTAAGCCAGTTCTTGAAGGAGAAGCGTGGTTGTGGTGCTATTAGCCTTGGAATGTGCGGCAAAATTGAACCCAGAGGAAATCCAACTACTACGATGGATTTGTTAACATCCCTGCAAAAATCTGATGATATCTCGAAACAAAGTATTTCAGCTATGGATTTTCTTCCTCAGCTTGTAGAAAACCCGTCTATAATTAGGTCACAGGCCAAGGCAGAGCCTAAAACTCCTCAAATGGCAATATTTTACTCCGGAAAGGTGTTGGTGTTTGACGATTTTCCGCCGGAGAAGGCGACGGAGATCATGGAGCTAGCCACCAAGTTAAGCTTTGATAATTCTGGGATCATCAAAAATCCCCCTTGTGCTTCTGTAGAAAATATCAATGAGGTTAAGGTGCCCCAAACAAGCATATCCCAAGAAGCTTCTCGTCCAGGCCCTCTCTCTTCTGGTTCAGATATGAGGTATCCGAGGAGAGCTTCGCTTTTGAAATTTCTGGAGAAAAGAAAAGAAAGGGTTATTGCAAGAGGACCATATCATATGAACCCTAAGCATGAAGCTGGAGGTAGAGCTGGAGGCCAACTAGAAGATCAATCTCGCAAACCCTTTGACCTTAACTTGCGAACTCATGTTGCGATTAAGGCATCGGCTTCTCTTGTTCATGCTTGCCCAGAGTTCTTCAGTGAATATGATCTTCAGATCCAGATTCTCCTTTTTTTCATGGTCTCTTTGTTCAATAGAAGCTACTTGCATTATTCCATTCCAGCCTCTCTCTTTCATGCCCACTCTCATCTGACTCGAGGGGACCTTCTCTAA 897 0.4504 MSTFSDTAANGRRAGKLAERSNFSQTCNLLSQFLKEKRGCGAISLGMCGKIEPRGNPTTTMDLLTSLQKSDDISKQSISAMDFLPQLVENPSIIRSQAKAEPKTPQMAIFYSGKVLVFDDFPPEKATEIMELATKLSFDNSGIIKNPPCASVENINEVKVPQTSISQEASRPGPLSSGSDMRYPRRASLLKFLEKRKERVIARGPYHMNPKHEAGGRAGGQLEDQSRKPFDLNLRTHVAIKASASLVHACPEFFSEYDLQIQILLFFMVSLFNRSYLHYSIPASLFHAHSHLTRGDLL 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1970 298 Pfam tify domain 101 133 IPR010399 -
Alju05g1970 298 ProSiteProfiles Tify domain profile. 100 135 IPR010399 -
Alju05g1970 298 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 14 209 IPR040390 -
Alju05g1970 298 MobiDBLite consensus disorder prediction 161 182 - -
Alju05g1970 298 SMART tify_2 100 135 IPR010399 -
Alju05g1970 298 Pfam Jas motif 185 206 IPR018467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1970 Alju-ChrAlju05 52417697 52423334 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1970 18 208 Tify Gene Family AT1G19180 33.953 1.24e-26 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Alju05g1970 tify 4.4e-15 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju05g1970 05 52417697 52423334 Alju05g1970 05 52417697 52423334 ECH