LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju05g1968	ATGGCCGTAGCTCCGGCAATCCTCCGGCCAACTCTCCTCTTTTTCTCCGCCTTCTTCGTGGTTTTCCGATTGGTGAATTCAATGTCAGAAGCTGAAGCTTTGGTTAATTTTAAAGCCTCATTATCCGATAATCAAGCTCTGAAAGATTGGGTGGTTAACTCTGTTCCTTGCAAAGAAGGCGAAGAATGGTACGGTGTTATCTGCAACGGTGGATTAATCTCTGGCATTCGATTAGAAGGAATAGGGTTATCAGGGAAGATTGATGTAAATCCATTGCTGGAACTCAAGCGGCTTCGAACTTTCAGCATTATGAGCAATTCATTTTCAGGTACAATTCCGGAAATCAATAGAATAGGTTTCTTGAGAGCCCTGTACTTGTCGGGAAATCAATTTTCCGGCGATATTCCGTCGGGTTTCTTCCAGAAAATGAGGTCCCTGAAGAAGCTATGTCTTAACGACAACAACTTTACGGGTCAGATTCCGTCGCAGATTCCTCAACTCCTTGAGCTACGCCTTGAGAATAATCAGTTTAGCGGTAACCTCCCAAATCTGAGCAAAACATTGTTGATGGAATTCAATGTGTCCAACAACAAATTGGAAGGCGAAATTCCGACGAGCTTATCAAAATTTAGTGCGAGCTCATTTTCCGGGAATCCGGGACTCTGTGGTGAGAAATTAAAAAAACCATGTCAAAATTCAGTTGAACCGCCAAAACCCATGGAAAATACGGAACAAGAACAAACTAAAGACAGCGCCGCCGCGTCTGATTCAAATTCTAGCAGTAAGAGTAGTAACACAGTGAAGATTGCGGCCATTGTTGTTGCATCAATTGTAGTGCTTCTCACAATTCTCGCTCTACTCTATGTTCGGTCAAGGCAAAAGAAGAAGGATAAGGGAATACTGGGTTCGGTCCGATCAGAGAACGATGACAACGAAGAATCATCAGCAGCGGTGCAAGTTCACGTTGCTGCACCGGAGAAGAAAGAAGAGACAATTATGTCCAGAAAATCAAGCCGTAATGGTTCCAGCAGGAGGGGTAAGGGCGGTCGTGGCGGTTGCAATGGCGGTGTCGTCGGAGAGCTTGTGATGATAAATAGTGAAAGGGGTGTGTTTGGGATGCTGGATTTGATGAAGGCAGCAGCAGAAGTTTTGAGCAATGGAGGGTTTGGATCATCCTATAAAGCAGTGATGGGTGATGGGGTTTCAGTGGTGGTAAAGAGGATGAGGGAGATGAATGTGTTGTCCAAAAATGGGTTTGATGCAGAGATGAGGAAGATCGGGAGTTTGAGACATAGGAATATCTTAACCCCTTTGGCTTATCATTACAGGAAGGATGAGAAGTTGGTGGTGTCTGAGTATGTTCCTAAAGGGAGTCTGCAATTTTTGCTGCATGGTGATCATGGACCATCCCATATTGAATTGGACTGGCCTACTGCTTTGAAAATTGTACGAGGGATTGTTGAAGGGATGGTTTATCTTCATAGACAGCTTGCTTCATCTGTTTTACCTCATGGAAATCTCAAGTCTAGCAATATTTTACTTGGTCTTGATTATGAGCCAATGCTAGTTGATTTTGGGTTATGCTCTTTGATCAACCCTGCTAATCTAAGTCAAGCCTTATTTGCTTACAAGACTCCTGAAGCCTTACAGAAAGGCCAAGTTTCTCCTAAATCTGATGTTTATTGTTTGGGAGTTGTCATTCTTGAGATTCTCTCTGGGAAATTCCCTTCCCAATATCTCAACAATGGCAATGGTGGAATTGATGTAGTTCAATGGGCTAACTCAGCAATATCTGAAGGAAGGATATTAGAGATGCTCGATCCTCAACTTGCAAGCTATAAAAATTCCATTGGTCAGATGGAGAGACTCCTCTATATCGGTGTTGCTTGCACCGCAAGCAACCTTGAGCAGCGACCAGACATGATAGAAGTGTTGAGAAGGATAGATGAAATACAAAATAAAGATTCCCAAGAATCAGGCTCAAAGGGTCAAGATGAGTGGTCCCATAGAAGTTTCGGATCAAGCAGCATTGGAAGCCAATCGGGACACCGGCACACTGATAGTGGTGATTTTTCCATTTCCTAA	2085	0.435	MAVAPAILRPTLLFFSAFFVVFRLVNSMSEAEALVNFKASLSDNQALKDWVVNSVPCKEGEEWYGVICNGGLISGIRLEGIGLSGKIDVNPLLELKRLRTFSIMSNSFSGTIPEINRIGFLRALYLSGNQFSGDIPSGFFQKMRSLKKLCLNDNNFTGQIPSQIPQLLELRLENNQFSGNLPNLSKTLLMEFNVSNNKLEGEIPTSLSKFSASSFSGNPGLCGEKLKKPCQNSVEPPKPMENTEQEQTKDSAAASDSNSSSKSSNTVKIAAIVVASIVVLLTILALLYVRSRQKKKDKGILGSVRSENDDNEESSAAVQVHVAAPEKKEETIMSRKSSRNGSSRRGKGGRGGCNGGVVGELVMINSERGVFGMLDLMKAAAEVLSNGGFGSSYKAVMGDGVSVVVKRMREMNVLSKNGFDAEMRKIGSLRHRNILTPLAYHYRKDEKLVVSEYVPKGSLQFLLHGDHGPSHIELDWPTALKIVRGIVEGMVYLHRQLASSVLPHGNLKSSNILLGLDYEPMLVDFGLCSLINPANLSQALFAYKTPEALQKGQVSPKSDVYCLGVVILEILSGKFPSQYLNNGNGGIDVVQWANSAISEGRILEMLDPQLASYKNSIGQMERLLYIGVACTASNLEQRPDMIEVLRRIDEIQNKDSQESGSKGQDEWSHRSFGSSSIGSQSGHRHTDSGDFSIS	694

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju05g1968	694	Gene3D	Ribonuclease Inhibitor	28	186	IPR032675	-
	Alju05g1968	694	MobiDBLite	consensus disorder prediction	226	262	-	-
	Alju05g1968	694	ProSiteProfiles	Protein kinase domain profile.	378	651	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Alju05g1968	694	MobiDBLite	consensus disorder prediction	236	262	-	-
	Alju05g1968	694	Pfam	Leucine rich repeat N-terminal domain	29	69	IPR013210	-
	Alju05g1968	694	MobiDBLite	consensus disorder prediction	666	694	-	-
	Alju05g1968	694	Gene3D	Ribonuclease Inhibitor	187	230	IPR032675	-
	Alju05g1968	694	MobiDBLite	consensus disorder prediction	653	694	-	-
	Alju05g1968	694	Pfam	Protein kinase domain	382	582	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Alju05g1968	694	PANTHER	LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1	14	657	IPR046959	-
	Alju05g1968	694	SUPERFAMILY	Protein kinase-like (PK-like)	382	647	IPR011009	-
	Alju05g1968	694	Gene3D	Transferase(Phosphotransferase) domain 1	454	673	-	-
	Alju05g1968	694	MobiDBLite	consensus disorder prediction	302	352	-	-
	Alju05g1968	694	Gene3D	Phosphorylase Kinase; domain 1	377	453	-	-
	Alju05g1968	694	SUPERFAMILY	L domain-like	28	223	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju05g1968	Alju-ChrAlju05	52373565	52376064	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju05g1968	12	651	Receptor kinase-like Gene Family	AT3G42880	43.140	2.81e-178	521

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-III	Alju05g1968		Pkinase	4.4e-28	CL0016