Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1942 ATGGCAATCAACTTGGCACCATGCCTTGCCTTCTTTATCTCCTTCCTCTTCCTCCACCTCCTTGTCCGGCATTTTTGTTGCCGCCGATATAACCTGCCGCCAGGACCAAAACCATGGCCTATCATCGGAAGCCTCAACCTCATAGGCCCTATTCCTCACCACTCCTTATATCAACTCTCCCAAAAATATGGACCCATCATGCACCTCCAGTTGGGCTTAAAACACATCGTCGTTGTCTCCTCCGCAGGCGTCGCTAAAGCCTTCCTCAAAACCCACGGCAAAACCTTCTCATCGCGACCAAAAACCAATGCCGGAAAGTACACAACCTACAATCACTCCGATTTGCTTTGGGCCCCCTACGGCCCACACTGGCGCCAAGCCCGCAAGATATACATCACACAACTATTCTCTCAGGAAAGCATGGAATCCAGTGAGTATATAAGAAAGGAAGAGATGAAAAGTTTGTTAAAGGAACTTTTCATTTCTTCGGGCAAACCGGTGCTACTGAAAGATTCCCTTTATGCTTTAACCCTAAATAATATAAGTCGCATGGTGTTAGGGAAGAAGTACGTGGAGAAGGATCAGAGTGGCTTTATGTTCAGTTGGGAAGAGTTTAGAAAGATGGTGGATGAGTTTTTCTTGCTCAATACGTTTGGGAATATCGGGGACTTGATCCCTTGGCTCAATTGCTTGGACTTGCAGGGTTATACAAAGAGAATGAAGGATATTAGTGCCAAGTTTGATAGGTTTCTGGAACATGTGTTGAAAGAACATGAAGAGAGAAGAAAAGGGGTTGAGAATTATGTGGCCGAAGACATGGTGGATGTACTTTTAAAGCTTGCTGAAGACCCCACTCTTGAGGTTAAACTTCAAAGGCACACAGTCAAAGCATTAATTCTGGACCTTGTGATAGCTGCAACAGGTACCTCCAATGTAACTGTAGAATGGGGAATGTCAGAGCTTTTGAAAAACCCAGAAATCATAAGGAAGGCCACAGAAGAGTTAGACAGAGTGATAGGAAGAGACAGGTGGGTTGAAGAGAAGGACATAGCCAACTTGCCTTATATTGAAGCCATTACCAAAGAAACAATGAGATTGCACCCCCCAGCTGCCGTGTTGCCTGCGACGACGTCAGCCATAGACGCCGACTCAAAAGTTTTAGGGTATGACATCCCAAAAGGGGCCCAAGTGATCGTCAATGTGTGGGCTATGGGCAGAGATCCTGCAAAATGGGAAAACCCTGATGAGTTTAACCCAGAGAGGTTCATAGGTAAGGGCATTGATGTGAAAGGAAGCCACTTTGAGTTATTACCATTTGGAGCTGGAAGAAGGATATGTCCTGCTTATCCTCTTGGTCTTAAGGTTGTTCAGGTCAGTTTAGCCAATTTGGTGCATGGCTTTTCATGGAGCTTGCCGGATCATATGAAGAAGGAGGACCTCAACATGGAGGAAATTCTCACGCTTGCTTGTTTCAGAAAACAACCTCTTGAAGCTGTTGTTAAGCCTAGGCTTTCATCTCATGATCTTTACCTCTAG 1536 0.4538 MAINLAPCLAFFISFLFLHLLVRHFCCRRYNLPPGPKPWPIIGSLNLIGPIPHHSLYQLSQKYGPIMHLQLGLKHIVVVSSAGVAKAFLKTHGKTFSSRPKTNAGKYTTYNHSDLLWAPYGPHWRQARKIYITQLFSQESMESSEYIRKEEMKSLLKELFISSGKPVLLKDSLYALTLNNISRMVLGKKYVEKDQSGFMFSWEEFRKMVDEFFLLNTFGNIGDLIPWLNCLDLQGYTKRMKDISAKFDRFLEHVLKEHEERRKGVENYVAEDMVDVLLKLAEDPTLEVKLQRHTVKALILDLVIAATGTSNVTVEWGMSELLKNPEIIRKATEELDRVIGRDRWVEEKDIANLPYIEAITKETMRLHPPAAVLPATTSAIDADSKVLGYDIPKGAQVIVNVWAMGRDPAKWENPDEFNPERFIGKGIDVKGSHFELLPFGAGRRICPAYPLGLKVVQVSLANLVHGFSWSLPDHMKKEDLNMEEILTLACFRKQPLEAVVKPRLSSHDLYL 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1942 511 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Alju05g1942 511 CDD CYP71_clan 64 496 - -
Alju05g1942 511 Pfam Cytochrome P450 33 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Alju05g1942 511 PANTHER CYTOCHROME P450 98A9 9 510 - -
Alju05g1942 511 Gene3D Cytochrome P450 27 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Alju05g1942 511 FunFam Cytochrome P-450 19 22 501 - -
Alju05g1942 511 SUPERFAMILY Cytochrome P450 33 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Alju05g1942 511 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Alju05g1942 511 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Alju05g1942 511 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Alju05g1942 511 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Alju05g1942 511 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Alju05g1942 511 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Alju05g1942 511 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Alju05g1942 511 PRINTS E-class P450 group I signature 176 194 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Alju05g1942 511 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Alju05g1942 511 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Alju05g1942 511 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Alju05g1942 511 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1942 Alju-ChrAlju05 52043461 52045932 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1942 10 505 Cytochrome P450 AT5G07990 42.773 1.52e-135 400