Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1937 ATGATAAGTGAAACAACTGTAAGAAACAGGTCTCCTTTCACTGCAATTCAATGGCAAGAACTTGAACAACAAGCTCTTGTCTTCAAATACCTGGTCTCAGGAAGTCCCATCCCACCTGATCTCATTTTCTCTGTCAAAAGAAGCCTAGACTCTTCACTCTCTTCATCTTCTTCTTCAAGGCTCTTCCCCTTCCATCCAATGGGATGGGGATGCCTAGAAATGGGATATGGCAGAAAAGTAGACCCAGAGCCAGGAAGGTGCAGAAGAACAGATGGCAAGAAATGGAGATGCTCAAAAGAAGCCTATCCAGACTCAAAATACTGTGAGAGGCACATGCACAGAGGCAAAAACCGTTCAAGAAAGCCTGTGGAAGTTTCTTCAGCAACAGCAACAACTGCTAGTGGCATTTCAACAAACACATCTTCACAGTCAATCTCTTCATCACCATATAGTAACAGAAGCCTTACCATGATGAGCAATCCCAATCCACACTCTTCAACTTCTCCTTTCCCTCTCTCTCTATTGCCCTCTGATACCCAACAACCTTATTCCCATATCTACCAAGATTCTTCTCTTAATCCCTTGTTCTACACCCATTCAACCTCATGCAGGCCTCTTGATTCTGATTTTTCTTCTCAAAAAAGCAATACCAACCACCTATTTTTGGACTCTGGATCTTATTCTAGGGATGAGGACTACAGGCATATTCATGGAATGAGGGAAGGTGTGGATGAGAGGGCTTTCTTTCCAGAAGCCTCAGGGAGTGTTAGGAGCTTTACTGATTCATATCAGCAATTACCAATGAGCTCCTGTAAGCCTTATTCAAACTCTCATTTCCAAAACATGAATGATAATCCTACTCCAAGGCAACAAGAAGAGCAGCATCATTGCTTTGTCCTGGAAAGAGACTTCAAATCACCAGGACAACTGAAACATGAGAATGAAACTGAAATGACCCAAAAATCCCTTCACCATTTCTTTGGTGAATGGCCTCCAAAGAACACAGATTCCTGGCTTGATCTTGCTTCAAATTCCAGAATCCCCTCTGGTATAATGTTTTATTATCTATAG 1071 0.423 MISETTVRNRSPFTAIQWQELEQQALVFKYLVSGSPIPPDLIFSVKRSLDSSLSSSSSSRLFPFHPMGWGCLEMGYGRKVDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEVSSATATTASGISTNTSSQSISSSPYSNRSLTMMSNPNPHSSTSPFPLSLLPSDTQQPYSHIYQDSSLNPLFYTHSTSCRPLDSDFSSQKSNTNHLFLDSGSYSRDEDYRHIHGMREGVDERAFFPEASGSVRSFTDSYQQLPMSSCKPYSNSHFQNMNDNPTPRQQEEQHHCFVLERDFKSPGQLKHENETEMTQKSLHHFFGEWPPKNTDSWLDLASNSRIPSGIMFYYL 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1937 356 MobiDBLite consensus disorder prediction 111 175 - -
Alju05g1937 356 ProSiteProfiles QLQ domain profile. 12 47 IPR014978 GO:0005524|GO:0005634|GO:0006355
Alju05g1937 356 PANTHER GROWTH-REGULATING FACTOR 5 11 339 IPR031137 GO:0005634|GO:0006351|GO:0032502
Alju05g1937 356 MobiDBLite consensus disorder prediction 122 175 - -
Alju05g1937 356 Pfam QLQ 12 45 IPR014978 GO:0005524|GO:0005634|GO:0006355
Alju05g1937 356 Pfam WRC 82 124 IPR014977 -
Alju05g1937 356 SMART QLQ_2 11 47 IPR014978 GO:0005524|GO:0005634|GO:0006355
Alju05g1937 356 ProSiteProfiles WRC domain profile. 81 125 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1937 Alju-ChrAlju05 51983151 51984399 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1937 10 329 GRF Transcription Factor Family AT3G13960 39.535 3.49e-62 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Alju05g1937 WRC 7.4e-21 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju05g1937 05 51983151 51984399 Alju05g1937 05 51983151 51984399 ECH