Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1933 ATGAGGCAACATCGATCACCAATAATCTTTGAAAAGGCAATGGCTTCTGAGAGTGATAATTGTATTAAGAGGAGAGTGAAACCAGTTGAAGCCATGAGAAATGTGCCTCTCGGTAAAGCAGCATGGACGCCAGAAGAAGATAAAAAACTAGCTGAGGTTATTGCAGTTCATGGGGCAAAAAGGTGGAAGTTCATTGCATCCAAAGCAGGTCTTAATCGATGTGGTAAGAGTTGTAGGTTGAGATGGTTGAACTATCTCAGACCCAACATAAAGAGGGGAAATATATCTGACCAAGAAGAGGATTTGATTCTTCGCCTTCATAAACTCCTTGGAAACAGGTGGTCTTTAATCGCCGGGAGACTACCAGGCCGAACAGATAATGAGATAAAGAACTATTGGAATTCTCATTTGAGCAAGAAAATAAAGCAGAGGGAGAAGCAATCAAGTGGGAGTTCAACAATAAGACAAGACAACCAACAAAAGGTGGTAGTAGAACATAAGATTCCTGAAGAACAAGAAGAAGCTAAGCAAATCAGAAAAGAGATTTCCACAGAGGAAGCTGAAGAAGACTCATCATTAAGACAGAATCTTGATGTGGACGGCTTCTTTGATTTTTCGGTAGAGGAAGGTCCATTGAATTTGGAGTGGGTTAGCCAGTTCCTTGAACTTGATGAAACAACTCTTGGACTCTTCTCGCTATAA 702 0.4088 MRQHRSPIIFEKAMASESDNCIKRRVKPVEAMRNVPLGKAAWTPEEDKKLAEVIAVHGAKRWKFIASKAGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKIKQREKQSSGSSTIRQDNQQKVVVEHKIPEEQEEAKQIRKEISTEEAEEDSSLRQNLDVDGFFDFSVEEGPLNLEWVSQFLELDETTLGLFSL 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1933 233 Gene3D - 95 196 - -
Alju05g1933 233 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 87 141 IPR017930 -
Alju05g1933 233 Gene3D - 40 91 - -
Alju05g1933 233 ProSiteProfiles Myb-like domain profile. 87 137 IPR001005 -
Alju05g1933 233 ProSiteProfiles Myb-like domain profile. 34 86 IPR001005 -
Alju05g1933 233 Pfam Myb-like DNA-binding domain 41 86 IPR001005 -
Alju05g1933 233 Pfam Myb-like DNA-binding domain 92 137 IPR001005 -
Alju05g1933 233 MobiDBLite consensus disorder prediction 160 193 - -
Alju05g1933 233 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 34 86 IPR017930 -
Alju05g1933 233 CDD SANT 96 137 IPR001005 -
Alju05g1933 233 Coils Coil 168 188 - -
Alju05g1933 233 FunFam MYB-related transcription factor 38 91 - -
Alju05g1933 233 MobiDBLite consensus disorder prediction 144 193 - -
Alju05g1933 233 CDD SANT 41 86 IPR001005 -
Alju05g1933 233 SMART sant 38 88 IPR001005 -
Alju05g1933 233 SMART sant 91 139 IPR001005 -
Alju05g1933 233 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 35 185 - -
Alju05g1933 233 SUPERFAMILY Homeodomain-like 38 133 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1933 Alju-ChrAlju05 51944252 51946418 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1933 39 141 MYB Transcription Factor Family AT5G40330 69.903 6.68e-52 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Alju05g1933 Myb_DNA-binding 6.6e-18 CL0123