Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1915 ATGTTGACCTGCATTGCGTGTTCCAAGCAGCTTAATGACAAGAGATCTCTTCCCCAACAAGATGAGCAAGAAGAAGCTGTTGATACACCCAGCACCAAGCAGGCCATTAAGGCCCTCACCGCACAGATCAAGGACATGGCAGTGAAGGCTTCTGGGGCATACAAAAATTGCAAGCCATGTTCAGGATCTTCAAATGGTAACAGGAACCAGAACTATGCTGATTCTGATATGGCTTCACAATCAGCTAGATTTCACTGGGCATACAAGAGGACTGGGAGCTCCAACTCAACCCCAAGGCTTTGGGGAAAAGAGATGGAGGCAAGACTGAAAGGGCTCTCTAGTGGTGAAGGAACTCCAGCGTCGGTGAGTGGCCGGACTGAATCGGTGGTGTTCATGGAGGAGGATGAGCCCAAGGAATGGGTTGCTCAGGTAGAGCCTGGTGTGCTCATCACTTTTGTTTCATTGCCTCAAGGTGGTAATGATCTGAAACGAATTCGGTTCAGCCGGGAAATGTTTAATAAATGGCAAGCTCAAAGGTGGTGGGCTGAGAATTATGACAAGGTCATGGAGTTGTACAATGTTCAGAGGTTCAATGAACAATTAGGTCCCCTGCCAACCCCGCCGAGATCCGAAGATGAGAGCTCGAAGATTGAATCTGTTAGGGACAGCCCTGTCACGCCTCCTCTGAACAAAGAGCGTCCACCGCATCATCTTCTTCACCGTCAAATGGGAATGGGATACTCCTCGTCAGATTCGCTGGATCATCATCACCACACGATGCAACAACGCCCATGCTATGAGACGAGCGGCTTAGCTTCGACGCCTAAACTCTCTGGCATCAGTGGGGTAAAGACTGAAACATCATCCTTAGATGGTTCTGTTAGGACTAGTTCATCAAGAGAGGGAGATCAGTCTGGTGAGCTTTCACTCAGCAATGCCAGTGATATGGAGACTGAATGGGTTGAACAGGATGAACCAGGAGTATATATCACCATCAGAGCCCTACCAGGAGGAGCCAGAGAACTTAGGCGTGTCCGGTTCAGCCGAGAAAGGTTCGGGGAAATGCATGCGAGGTTGTGGTGGGAGGAGAACCGAGCCAGGATACAGGAGCAATATTTTTGCTGTCTGGGGCTGAAAGCCTGGAACAGAAGATCTCTGAGTGGTAAAACGATTTCAAAACCCTCGTCCCTCTTAGCTCCCAAACCCCTTCTCTTCCATTCTGAAGCCGCTTCCCAGTCTCTGGCCTTCGAATGCGAACCCTACCCATTCCTTTTCTCTTATCTATTTTATCTTATTTGGTTTCAAGGTTTGATTTTTAGCGAGATACCTAGTTTTTGA 1338 0.4865 MLTCIACSKQLNDKRSLPQQDEQEEAVDTPSTKQAIKALTAQIKDMAVKASGAYKNCKPCSGSSNGNRNQNYADSDMASQSARFHWAYKRTGSSNSTPRLWGKEMEARLKGLSSGEGTPASVSGRTESVVFMEEDEPKEWVAQVEPGVLITFVSLPQGGNDLKRIRFSREMFNKWQAQRWWAENYDKVMELYNVQRFNEQLGPLPTPPRSEDESSKIESVRDSPVTPPLNKERPPHHLLHRQMGMGYSSSDSLDHHHHTMQQRPCYETSGLASTPKLSGISGVKTETSSLDGSVRTSSSREGDQSGELSLSNASDMETEWVEQDEPGVYITIRALPGGARELRRVRFSRERFGEMHARLWWEENRARIQEQYFCCLGLKAWNRRSLSGKTISKPSSLLAPKPLLFHSEAASQSLAFECEPYPFLFSYLFYLIWFQGLIFSEIPSF 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1915 445 Pfam Transcription factor regulating root and shoot growth via Pin3 138 192 IPR013591 -
Alju05g1915 445 Pfam Transcription factor regulating root and shoot growth via Pin3 317 372 IPR013591 -
Alju05g1915 445 MobiDBLite consensus disorder prediction 199 317 - -
Alju05g1915 445 Pfam Transcription factor BRX N-terminal domain 24 60 IPR027988 -
Alju05g1915 445 MobiDBLite consensus disorder prediction 263 317 - -
Alju05g1915 445 ProSiteProfiles BRX domain profile. 318 373 IPR013591 -
Alju05g1915 445 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 372 IPR044532 -
Alju05g1915 445 ProSiteProfiles BRX domain profile. 138 193 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1915 Alju-ChrAlju05 51664398 51669390 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1915 1 373 Major Intrinsic Protein MIP AT1G31880 45.876 1.84e-98 297
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju05g1915 05 51664398 51669390 Alju05g1915 05 51664398 51669390 ECH