Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1903 ATGGCCCCTGATGCTTCTTCATCCTCAGCTAAATTTTACCTCAAGAAATATGATGTTTTTATCAGCTTTAGGGGTGAAGACACTCGTGCCAACTTCATGAGCCATCTTTATGAAGCTTTCTGCAGAAAACAAATAAGAACATACATAGACTACAAACTTCCCAAAGGAGATGAGATCTCAGCAGCACTCAAGCAAGCAATCGAGGATTCCTATTTATCTGTGGTGGTATTCTCAGAAAAGTATGCTTCTTCAAGATGGTGCTTGGATGAACTCACCCACATACTTCATTGCAAAAAGGTTCAAGAACAGATTGTTATTCCTATCTTTTATAAAGTTGAGCCATCTCATTTAAGAAATCAGACTGGCCTTTACGGGCAAGCATTTGAGAAATTTGAGAGAGACCCTAAGGTCAACCAACGGAAGATGCAAATATGGAAGCATGCTCTTAATGAAGCTGCAAACTTAGCTGGGTATGGCTCTCACACATTCAGGAACGAATCTGAACTGATTCAAAAGACTGTTCAAGACATATTGCAAAAGTTGAGTCACAAATACCCCCCTGCTGATTTGAAAGGACTTGTAGGGATTAATGACAAGTGCGTAGAGATTGAATTTTTGTTAAGAGATTTTAAAACCATTGGAATTTGGGGCATGGGGGGCATTGGCAAATCAACCATTGCCAAAACTATATTTGCCAAATACTCTTCCCATTATGAAGGCTCTTGTTTCTTGGAAACTGTTAGAGAAATTTCCGAAAATGGACTTGCTGAATTACGTTATAAGTTTATCTCCTGTTTACTGAAGGAAGAAGGTCCCCGTATTGATCCTTTAACAACTTTTGTTCTTTCCAGACTTAGTAGTATAAAAGCTTTTGTTGTTCTTGATGATATCAGTACTGTGGAGCAATTAGAATATTTGGTTGGAGAACCTTTTTGCTTTGGGCCAGGAAGTAAAATTCTCATCACAACTAGGGACAAGCATGTGCTTAGCAAAGGAGTTGATGTAATATATAAGGGGACTAATAAACTTGAAGGCATAATGTTAGATGTGTCTCGAATCAAAGATATACAATTGAATGCCAAAACTTTCAAAAGGATGTCGAATCTGCGGTTTCTGAAATTTTATTCTGATTTAAACCATTGCTCAAGTCATGTATATTTACCAAAAGTTCTTGAATTTTTCCCTAACAAAATAAAATATCTAGAGTGGTATGGATACCCACTTAAATCTCTGCCACCAACTTTTTGTCCTGAAAATCTGGTTGAGCTTCACATGCCTAATAGCCATGTTCAAAAGCTTTGGGATGGAGTTCAGGATCTTGTGAACTTGAAAGAGATAAACCTTAGCGGATGCAAAGGATTGAAGGAGCTGCCAAATTTCTCTAAAGCCTTAAACCTTAAAGGAGTATCTCTTGTTGATTGTGAAAGTTTGCATTACGTTCATTCTTCTATTTTGTCTCTCCACTCACTTGTCGAATTGGACTTAAGTGGCTGCAAGAGGCTCAGGAGTCTGAAAACTGAGTTTCATTTAAAATCTCTACAGTACATTCGGGTGGAAGAATGCATAAGCCTCAAGGAATTTTCGGTGTCATCAGAAAAAATAAGGGAGTTGAATCTATGTGACACGGGAATCGAAAATTTGCACTCGTCTGTAGGGAATTCAAGTAATCTGGAAGTGCTGGATCTGTATGGCTTAAGACTGAAGAAGATTCCAAAACAGTTATCATGCTTGAGAACATTGACAATGCTCAGGCTTCCTAATTGTGAAGTGCTTGATAATTCGATGCTACATATGTTATTTGGTGGCATGTTGTCTCTAACTGTGGTGTATTTGACAGATTGTAGTCATATAACTGAACTTCCCAACAACACAGAACATCTTTTAAAATTGGAATGTCTCTTCCTATCGAATTGCAGGAAGCTTCGTTCCTTACCAAAACTTCCACCATCCATTGCAACCTTAGATGCCTATAACTGCATGTCATTAGAGATAGTTTCAACTTTTAGACCACTGAACAAGAATGAAAAATACTTCTCATTTATGAATTGTGTGAAACTGAATGAACAATCACTTCATAGTATCATTGAAGATGCCTATTCTGTAATCAATGGAGCTGACTGCAGATTTCAACAAGAAAGAGAGGCTAAAGTTGCTCGTAGTTTGATTTGCTTTCATGGAAGTGAAGTACCTGAGTGGTTCAGATATCGAACAGATGGAGGCGCCGTCGTTATTGAAGTCCTTCAAAATTCAGACTTGTTGGGTTTTTCCCTCTGCGTGGTTCTTCAGTTTCACTCAGAGAAGCCATGCTATGTTGCACTGAACTGTGCGTGCCACTTGGGAGGTTTAAATGTGGCAAATTTACCGTACAATAATCTGTTTCTTCCAATTATGAATTCTGATCATGTGTACATATGGAATAATGAGTTTGGTTCTGGTGAGATATTGAAGGCGATTGAAAGAAGAAGAAGAAATGAAGAATTGGTCACTGACATAAAGCTTTGCTTTGAATTCAATGTTGAGCCTCGTTTCGGGTACGAGGTTGGTAACATCAACGAGGTAGTTGGTATCAAAGAATGTGGGGTGTGTCCATTATATGTGTCAAAATGTCTGAAATCCTTTCCACAAATGGAAATGGCGAAGAAGAATAAGAAGAGGCCTCGAGATGTGGATGAACAACAACCACTTATTCAGTTGAAGAAACTCAAGCTTGATTGTGATTCTCATACCAACACATGTCATGATATTGATGAATTGAAGGCTCTTTTCATGACACTAAACATCACTTGA 2787 0.3821 MAPDASSSSAKFYLKKYDVFISFRGEDTRANFMSHLYEAFCRKQIRTYIDYKLPKGDEISAALKQAIEDSYLSVVVFSEKYASSRWCLDELTHILHCKKVQEQIVIPIFYKVEPSHLRNQTGLYGQAFEKFERDPKVNQRKMQIWKHALNEAANLAGYGSHTFRNESELIQKTVQDILQKLSHKYPPADLKGLVGINDKCVEIEFLLRDFKTIGIWGMGGIGKSTIAKTIFAKYSSHYEGSCFLETVREISENGLAELRYKFISCLLKEEGPRIDPLTTFVLSRLSSIKAFVVLDDISTVEQLEYLVGEPFCFGPGSKILITTRDKHVLSKGVDVIYKGTNKLEGIMLDVSRIKDIQLNAKTFKRMSNLRFLKFYSDLNHCSSHVYLPKVLEFFPNKIKYLEWYGYPLKSLPPTFCPENLVELHMPNSHVQKLWDGVQDLVNLKEINLSGCKGLKELPNFSKALNLKGVSLVDCESLHYVHSSILSLHSLVELDLSGCKRLRSLKTEFHLKSLQYIRVEECISLKEFSVSSEKIRELNLCDTGIENLHSSVGNSSNLEVLDLYGLRLKKIPKQLSCLRTLTMLRLPNCEVLDNSMLHMLFGGMLSLTVVYLTDCSHITELPNNTEHLLKLECLFLSNCRKLRSLPKLPPSIATLDAYNCMSLEIVSTFRPLNKNEKYFSFMNCVKLNEQSLHSIIEDAYSVINGADCRFQQEREAKVARSLICFHGSEVPEWFRYRTDGGAVVIEVLQNSDLLGFSLCVVLQFHSEKPCYVALNCACHLGGLNVANLPYNNLFLPIMNSDHVYIWNNEFGSGEILKAIERRRRNEELVTDIKLCFEFNVEPRFGYEVGNINEVVGIKECGVCPLYVSKCLKSFPQMEMAKKNKKRPRDVDEQQPLIQLKKLKLDCDSHTNTCHDIDELKALFMTLNIT 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1903 928 ProSiteProfiles TIR domain profile. 15 181 IPR000157 GO:0007165
Alju05g1903 928 FunFam Disease resistance protein (TIR-NBS-LRR class) 14 183 - -
Alju05g1903 928 Pfam TIR domain 16 195 IPR000157 GO:0007165
Alju05g1903 928 Gene3D - 14 178 IPR035897 -
Alju05g1903 928 PRINTS Disease resistance protein signature 212 227 - -
Alju05g1903 928 PRINTS Disease resistance protein signature 485 501 - -
Alju05g1903 928 PRINTS Disease resistance protein signature 284 298 - -
Alju05g1903 928 Gene3D - 179 335 IPR027417 -
Alju05g1903 928 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 177 331 IPR027417 -
Alju05g1903 928 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 158 IPR035897 -
Alju05g1903 928 Pfam C-JID domain 724 866 IPR045344 -
Alju05g1903 928 Pfam NB-ARC domain 208 330 IPR002182 GO:0043531
Alju05g1903 928 SUPERFAMILY L domain-like 346 685 - -
Alju05g1903 928 Gene3D Ribonuclease Inhibitor 338 507 IPR032675 -
Alju05g1903 928 Gene3D Ribonuclease Inhibitor 508 666 IPR032675 -
Alju05g1903 928 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 329 IPR044974 GO:0006952
Alju05g1903 928 SMART till_3 16 155 IPR000157 GO:0007165
Alju05g1903 928 FunFam Disease resistance protein RPS4 340 532 - -
Alju05g1903 928 Pfam Leucine Rich Repeat 419 438 IPR011713 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1903 Alju-ChrAlju05 51396150 51399915 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1903 339 667 WRKY Transcription Factor Family AT4G12020 34.503 4.39e-37 149