Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1891 ATGGGAACTTCTCATGGTGAAGAGGAGAGATTGAGCCTTCTTTACGAAGCATCACGCAACGGGTCGGTAACAACTTTGAAATCGCTTTTGAAACAAGAACCATTAATCCTCCACAAGATCTCACAAAGTGGCTTCTCCGAAACTCCTTTACACATATCATCTTTGCTTGGCCACCTTGAATTTACGAAGGCACTTCTTACATACAAACCCAAACTGGCCATTGAGGTTGACGCTTCCCGAAACACACCTCTTCACTTGGCTTCCGCAGAAGGTCACATCGACATCGTGAAGGAACTGCTTAAGGTTAATAACAAGCCATGCTTGTTTCCTAATGAAGAAGGCAAGATTCCTTTGCACTATGCAGTTATGAGAGGGAGAACAGAGGTTGCCAGAGAGTTGGTTAAAGCGAAGCCGGAGTCTTTGAGCTTTCTTGATAATGGGAACACAGTGTTTCACTTGTGTGTGATATACAATCATTTGGAAACTCTCAAAGGTTTGGTGGAAATGGAACTTGCCATTTCTGGGAGGCTTCTTTTCTCCACAAGTTCTGATGCAATGGGCAACACCATTGTCCATTTAGTAGTCTCGTCCAAGCAAGTTGAGACAATAAGGTACCTCTTATCAATCCCAAAAGTAATAGAACTGGCGAGCTTGAAGAACGACATGGGTCTCACTGCCTATGACATCCTGAAACGCAGTCCAAGAGATCTCAAAATCCTACAAATACAAGTCATGCTGATGGAATATTCCGGAATCGGAACTGAAAATAACGGAATATTCCAAACTCGTTCACACTCACCATCACCACAAGTTGCAAGACCTCGAATTCGAAGGAAGAAGAAAAGAAACTGTTTGGTAAGGATTTTAAAATGGATTGGAGGTTGGTTCAGAAACAGAGGTGACTGGGTGGAAGAAATGAGAGGAAATCTGAGTTTAGTATCTACTGTTATAGCCACCATAACATTTCAGTCATTAATAAACCCACCTGGTGGCTCCATTCAACAAGGCTTAGGTCAAGGCTCACCCAATGAAGCCCTAAACTGCACAATCCTTAATAACAACGAGTCTTATTGTCCTGGTGAAGCGGTCTCATCTTTTCATGACCAAAATCGGTTTCTGTCGTATGTAATTTGCAACACCATCTCTTTCATTTCATCGCTTAGCGTCACCCTATTGCTTGTAAGTGGAGTTCCTATGAAGAACAAAGCTTTGATATGGCTTCTATCCGTAGGCATGTGTATTACTCTCACAACCCTAGCCCTTGCCTACCTAATTGCCCTTAGAATGGTGATGCCAGATCATCTTTGGGATAATAAAGCAGCTTCGATCACCATTAAAGCGTCAATCTTGGCCTGGTCTGGATTGCTTGTGCTGATTATGGTGTTAATCACACTGCGCCTTATAATTTGGATCATAAAGAAATGTGTCAGAGCAATCAGAAATCTGTTCACATGTGGAATTAGAGAAAGATGA 1473 0.4236 MGTSHGEEERLSLLYEASRNGSVTTLKSLLKQEPLILHKISQSGFSETPLHISSLLGHLEFTKALLTYKPKLAIEVDASRNTPLHLASAEGHIDIVKELLKVNNKPCLFPNEEGKIPLHYAVMRGRTEVARELVKAKPESLSFLDNGNTVFHLCVIYNHLETLKGLVEMELAISGRLLFSTSSDAMGNTIVHLVVSSKQVETIRYLLSIPKVIELASLKNDMGLTAYDILKRSPRDLKILQIQVMLMEYSGIGTENNGIFQTRSHSPSPQVARPRIRRKKKRNCLVRILKWIGGWFRNRGDWVEEMRGNLSLVSTVIATITFQSLINPPGGSIQQGLGQGSPNEALNCTILNNNESYCPGEAVSSFHDQNRFLSYVICNTISFISSLSVTLLLVSGVPMKNKALIWLLSVGMCITLTTLALAYLIALRMVMPDHLWDNKAASITIKASILAWSGLLVLIMVLITLRLIIWIIKKCVRAIRNLFTCGIRER 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1891 490 ProSiteProfiles Ankyrin repeat profile. 113 135 IPR002110 GO:0005515
Alju05g1891 490 ProSiteProfiles Ankyrin repeat region circular profile. 113 135 - -
Alju05g1891 490 SMART ANK_2a 186 215 IPR002110 GO:0005515
Alju05g1891 490 SMART ANK_2a 113 143 IPR002110 GO:0005515
Alju05g1891 490 SMART ANK_2a 79 108 IPR002110 GO:0005515
Alju05g1891 490 SMART ANK_2a 45 74 IPR002110 GO:0005515
Alju05g1891 490 SMART ANK_2a 9 39 IPR002110 GO:0005515
Alju05g1891 490 SMART ANK_2a 146 175 IPR002110 GO:0005515
Alju05g1891 490 Pfam Domain of unknown function 301 429 IPR026961 -
Alju05g1891 490 ProSiteProfiles Ankyrin repeat profile. 79 101 IPR002110 GO:0005515
Alju05g1891 490 Pfam Ankyrin repeats (3 copies) 14 101 IPR002110 GO:0005515
Alju05g1891 490 Pfam Ankyrin repeats (3 copies) 111 168 IPR002110 GO:0005515
Alju05g1891 490 SUPERFAMILY Ankyrin repeat 14 231 IPR036770 -
Alju05g1891 490 ProSiteProfiles Ankyrin repeat region circular profile. 79 101 - -
Alju05g1891 490 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 11 464 - -
Alju05g1891 490 Gene3D - 3 240 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1891 Alju-ChrAlju05 51269777 51272302 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1891 14 471 Miscellaneous Gene Families AT5G15500 26.216 4.64e-32 126