Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1873 ATGGCTCTGTTGGTAACACCGTCAAATCCAGAACTCGGCTCTACCGTCATCGCCGTTGATGATGACGTCAATAGCGTGTACGCTGTCAAATGGGCGATTCATAATCTTTTGCAGAAGAACTCAGCTTGCATCCTCATTCACGTTCGGCCCAAAAATTTACATCCTCGTAGGATTGCAGATGATGTTGATTCTGTCCCCAAAGGAGGTCGTCCACCAACTGAAGAAGAATTAAAACAAGTTTTTCTTCCCTTCCGGGAATTTTTCGCACTAGAAGGGATCTCAACGAAGGAGTTGGTTCTGTACGGCAATGATGTTACAAGTGCACTTACTGATTACATCACTGACCATTCTATCAGCAACATTGTTGTTGGCGCTTCCCACCGCAATGCTCTTACAAGGAAATATAAAGGGTTAGGTGTTTCAAACAGTTTAATGAGGTCTGTGCCAGAGTGCTGCACAGTACATATTATATCAAAAGGAAAAGTGATAAATATCCAACCAACAGTTTTCTCTCAAAGTATTAGCATCATACCAAGTATATCGATGGAGGACACATCCTCTCGGGCAAATTCACAACTGGATGAATTGCATAATCTTCTTCCTGATACCTCAGATTCTGAAGATATAAACAGAAAATCATTCAAACATAGTTGGCCAGGCTCAGGTCTTGATAGGGTATATGCTGGTGAAAACAACGACACTATGCAGGTGAAAACACAAGAGTCTTGTGAAGATGCTAATTTATCAAAGGTGGAAGCACAAAAATCCTATGAAGAGGCTAATTCATCAAAGGTAGAAGCACATAAGTCCTATGAAGAGGCTAATTTAGAAAGATTATCGGTTGAAAACACCTCACCAAAGTATTCATCAAAACAAAATTCCCTTTCATTTTCTGGTGACAATTCAAGGATGCTTCGTTCTCAATTGGCTCCTTTGTTACCTGAAAGCCAAGTTATATCTGTGAACTCACATGATCTCAAGAGGACCTCGTCAAATGCCAAAGTAATGGAGCTTGAACAGATTATGGAAGAAGAAGAACGCAACTTAAAGCATGCAGAAATAAGGGCCATGCAGGAAGAGGAAGAGAAGAAGACAGAATCATATATGTTGACACATAATAATAATAATAATAATAAAAATATTCAATGTAGAAATTTCTATATCAAGGACATTGAAGTTGCAACTCGTTGCTTTAACAGTCATTTGAAAATTGGTGAAGGAGGATGCGGATCTGTTTATAGAGCTGTGCTTGATTTCACTGATGTTGCTATTAAGGTCTTGAAACCAGACATAGACCAAGGAGAGAGACAATTTCAACAAGAGGTTGAGATTTTGAGCACCTTAAGGCATCCAAACATTGTTCTCCTGCTAGGTACATGCCCAGAGTATGGATGCCTTGTGTACGAGTACCTGGAAAACGGCAGCTTAGAAGATCGTCTCTTCCAGAAAAACAACACTCCCCCACTTCCATGGAGAATCAGATTCAAAATAGCTGCAGAAATCGCGGCCGGCCTTCTTTTCCTTCACAACACAAAACCCGAACCACTGGTGCACCGTGACCTCAAGCCATCAAACATTCTCCTGGACAGGAACTATGTGAGCAAGATAAGTGATGTTGGTTTGGCTCATCTTGTTCCTTCTTCTGTACATGACAAAACCACTCAGTATCACATGACAGAAGCAGTTGGTACATTTTGCTATATTGATCCAGAATACCAACAAACAGGATTATTGGGAGTAAAATCTGATACATACTCGCTGGGTATAATTCTGCTACAAATTCTTACTGCTAAGCCTCCTATAGGTTTGTCTCACCTTGTTGAGAAGGCTATCCAAGATGGTACGTTTCAAGAGGTACTTGATGGGAGCGTGCCAGATTGGCCTGTTGAAGAGGCTTTATCTTGTGCTTTGTTGGCTTTAAAGTGCTGTGAGATGAGGAAAAGGGACAGACCAGATCTTCGTTCTGTCATTTTGCCGATGTTGAATCGACTCAGAGATCTGGGAGGAGCCATTGAAGGTGATTGTCTTCCTGCGAGCCAGAGAAGGCAGGCCTGTTACCACCAACAACAGGAAAGAAATATGTTAGGGAAACAAACAAGGACTTGTACAGAGGCTGCATCTCTTTTTTCGTACGATAGTGCGAAGCAAGCGGCCCGGCTCCCTGCCACACCGCCCTACCAGCTCGATATTTTCCCGCAAACCCATACGGTAACCTGCTCTGTCCTTGTCCCTGTTCTTGTTCCTGTCCCGCAGTTTGCGCGCGCCGCCTTGCTCTGTATCGCACCCAACCCTAACCCTAATCGCCTGGAGGCCACTCCAATGGCGTCCCATTCCCCTGATCGAGAATCAGGATACGACCGGCAAACCCCTACGCGCCTCTATAATCCGTACAAGGACCTCGAAGTCCCCATTCGGAACCTCTACCAGCTTCCAACGTCCCCTGAGCATCTCTTCGTTGAGGAGGCTCGCCGCAAGCGTCGATCCTGGGGTGAGAATCTCACGTTTTACACTGGCTGCGGCTACCTTGCGGGCGCCGTTGGGGGTGCCGGCGTAGGCCTCGTCGACGGCGTGAAATCTTTTGAATCTGGCGACACCACGAAGCTCCGGATAAACAGGGTCCTTAACGCTTCTGGCCATTCCGGTCGGTCTTGGGGTAACCGAGTTGGTATTATTGGATTGTTATATGCCGGCATCGAGAGCGGAATAGTGGCCGTGAGGGACACCGATGATGTGTGGAATAGTGTGGCGGCGGGGCTTGGCACTGGTGCATTGTATCGGGCTGCGAGAGGGGTGAGATCAGCTGCAGTGGCCGGAGCCGTAGGCGGAGTTTTAGTCGGTGTCGCCGTAACCGCCAAGCAGGCGTTGAAACGATACGTTCCAATTTGA 2886 0.4577 MALLVTPSNPELGSTVIAVDDDVNSVYAVKWAIHNLLQKNSACILIHVRPKNLHPRRIADDVDSVPKGGRPPTEEELKQVFLPFREFFALEGISTKELVLYGNDVTSALTDYITDHSISNIVVGASHRNALTRKYKGLGVSNSLMRSVPECCTVHIISKGKVINIQPTVFSQSISIIPSISMEDTSSRANSQLDELHNLLPDTSDSEDINRKSFKHSWPGSGLDRVYAGENNDTMQVKTQESCEDANLSKVEAQKSYEEANSSKVEAHKSYEEANLERLSVENTSPKYSSKQNSLSFSGDNSRMLRSQLAPLLPESQVISVNSHDLKRTSSNAKVMELEQIMEEEERNLKHAEIRAMQEEEEKKTESYMLTHNNNNNNKNIQCRNFYIKDIEVATRCFNSHLKIGEGGCGSVYRAVLDFTDVAIKVLKPDIDQGERQFQQEVEILSTLRHPNIVLLLGTCPEYGCLVYEYLENGSLEDRLFQKNNTPPLPWRIRFKIAAEIAAGLLFLHNTKPEPLVHRDLKPSNILLDRNYVSKISDVGLAHLVPSSVHDKTTQYHMTEAVGTFCYIDPEYQQTGLLGVKSDTYSLGIILLQILTAKPPIGLSHLVEKAIQDGTFQEVLDGSVPDWPVEEALSCALLALKCCEMRKRDRPDLRSVILPMLNRLRDLGGAIEGDCLPASQRRQACYHQQQERNMLGKQTRTCTEAASLFSYDSAKQAARLPATPPYQLDIFPQTHTVTCSVLVPVLVPVPQFARAALLCIAPNPNPNRLEATPMASHSPDRESGYDRQTPTRLYNPYKDLEVPIRNLYQLPTSPEHLFVEEARRKRRSWGENLTFYTGCGYLAGAVGGAGVGLVDGVKSFESGDTTKLRINRVLNASGHSGRSWGNRVGIIGLLYAGIESGIVAVRDTDDVWNSVAAGLGTGALYRAARGVRSAAVAGAVGGVLVGVAVTAKQALKRYVPI 961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1873 961 Gene3D HUPs 14 158 IPR014729 -
Alju05g1873 961 PANTHER OS02G0152300 PROTEIN 16 714 - -
Alju05g1873 961 MobiDBLite consensus disorder prediction 770 789 - -
Alju05g1873 961 SMART serkin_6 398 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju05g1873 961 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 369 470 - -
Alju05g1873 961 Coils Coil 328 362 - -
Alju05g1873 961 ProSiteProfiles Protein kinase domain profile. 398 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju05g1873 961 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 16 155 - -
Alju05g1873 961 Gene3D Transferase(Phosphotransferase) domain 1 471 668 - -
Alju05g1873 961 FunFam Os07g0541700 protein 471 564 - -
Alju05g1873 961 SUPERFAMILY Protein kinase-like (PK-like) 377 657 IPR011009 -
Alju05g1873 961 Gene3D Phosphorylase Kinase; domain 1 368 470 - -
Alju05g1873 961 CDD STK_N 14 160 - -
Alju05g1873 961 ProSitePatterns Serine/Threonine protein kinases active-site signature. 516 528 IPR008271 GO:0004672|GO:0006468
Alju05g1873 961 Pfam Tim17/Tim22/Tim23/Pmp24 family 835 944 - -
Alju05g1873 961 Pfam Protein kinase domain 400 655 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju05g1873 961 Pfam Universal stress protein family 16 149 IPR006016 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1873 Alju-ChrAlju05 50840802 50847883 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1873 97 675 Receptor kinase-like Gene Family AT5G12000 43.860 1.86e-154 468
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Alju05g1873 Pkinase 3.5e-41 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju11g0529 11 5698928 5699494 Alju05g1873 05 50840802 50847883 CCT