Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1869 ATGACGTCGACGGTCATTAGCTACACCATGGTCGTCACCGGTCCCGGGGCCGACCACCTTATCATGGGCAGCAACTTTTTCGGTTCTAAAGAACCTTCGCCTCCTAGGCTAGATGATCAAGTTGCAGAGAAAAAAGCACATGTTGCAGATCTGAAAAGCATGAAGAAATATGAATGCCATGCTCCAAGGAAAGAAAAGGGAACCCAACAACAACAATCATACGACTTTACCTTTGCTTGGGTCGTAGAGAAGGGAATTCCAGAAGTATTTGCGCATGTCGTTTTTGGTTCTGATGAGATCTTCCTTGTGAGTCTCACTGTTCATCCCATTCCTAATCTCACTTCTGAGCCTCTTCATTTCATCTGCAACTCTTGGGTATATATATCCAACAACACACGACTCCCTCGTTTTTTCTTCATCAACAAGGCGTACCTGCCTAGTCAAACACCAGGACTAGTGGGAGTTTACCGAAAAGTACAGCTGCAATGTTTAAGAGGAGAAGCAAGTGAAGTTGAAGATGCTTATGGAGTTCGCAAGGAATGGGATAAAATCTATGAGTATGCGACTTACAATGACTTGGGTAATGTTGATGCAAATCCAGATCTTGCTCGTCCTATTCTTGGAGGATCCACCCAATATCCCTACCCCCGTAGGCTCAGAACTGGAAGGGCCCCATCAAAAAATGATCCGAGCACTGAGAGTAGACTCCCTCCAGAAAATTCCTTTTCGATCTATGTTCCAAAAGATGATAGATTTGGTGATCAGAAGCTGTTTGAGTTTGTGCAACATTTTCCCAAGTCAACAATGAACCTTATGAAGTCATACATATCAGAGGCATTGGAGGCCTCAGGAAAAGAATTTCAAAGCTTTGAGCATGTTCTTAAAGTGCTTTATCAAGATGGTTTCACCTTTAATGTGCCTAAAGCCGTACTTGATCATATTGCTCAAGCGTTCCCTATTCCATCTCCCCCAGATAATGGCAATCTGCTATTAAAGTTTCCTATTCCTAGTGTCATTCAAGATAATCTGGATGGATGGATGACGGATGAAGAATTTGCACGAGAGATGCTTGCTGGTGTGAATCCTGTTTTAATCTGCCTCCTACAAGAGTTGCCCATAAAAAGCACGCTAGATATTAATCTCTACGGTGATCATACCTCTACCATAACAAGACAACACTTGGAGAAGAACATGAATGGGCTCACAGTTTATGAGGCACTGAATTCCAAGAGATTATTCATATTAAATCACTATGATGCATTTATGCCATATTTGAGGAAGATCAATGGGACTTCTAGAAAGGCTTATGCAAGTAGAACAATCCTTTTCCTTCAAAATGATGGGACTTTGAAGCCACTTGCTATTGAGCTGAGCTTACCTCACCCTGATGGAGATCAATTTGGTGCTGTTAGTAAAGTGTATCTTCCTGAAACTGAAGGTGTTGAGGGTACCCTTTGGCTTTTGGCTAAAGCTTATGTAGTTGTCAATGACACAGGCTATCATCAACTAGTCAGTCACTGGCTAAATACTCATGCTGTGATGGAGCCATTTGTGATTGCAACACACAGACAACTCAGTCAACTTCACCCAATTCATAAACTTCTTCATCCTCATTTTCATGACACCTTGTTCATCAATGCACTTGCTCGCCAAAACTTAATCTCTGCAGATGGAATCATAGAGGACTCATTCTTGCCTGGGAAATATTCCATGGAGATGTCCTCTGTGGTTTACAAGAGTTGGAATTTCCTTGAACAAGCCTTACCTGCTGATCTCATCAAGAGAGGAATGGCAGTAGAGGATCCAAGTGCTCCTCATGGCCTTCGCATTGTGATAGAAGACTACCCTTTTGCTGTTGATGGACTTCTAATATGGGATGCTCTGAATACCTGGGTTTATGACTATGTTACTTATTACTATGAATCAGATGAGATCCTTAAGCAGGACCCTGAGCTACAATCATGGTGGAAAGAACTAGTAGAAGTAGGTCATGGTGACCTAAAAGCTGAGCCATGGTGGCCAAAAATGCAGACTCGTCAAGAGCTAATTCACTCTTGCACTATCATCATATGGATAGCTTCAGCTCTACATGCAGCTGTGAACTTCGGCCAGTACCCTTATGGAGGATATATCCTAAACCGTCCTACTTTAAGCAGAAGGTTGGTGCCTGAGAAGGGAACTGAAGAATATGAAGAGATGGTGAAGAATCGAGAGCTAGCTTTCTTAAAAACAATCGCACCAAAGTTTGAGACACTTCTTGATCTTTCAATTATAGAGATATTGTCAGGCCATACCACTGATGAGGTTTATCTTGGAACAAGGACTATTCCTTACTGGACATATGATAAGAAGGTGTTGGAGGATTTCAAGAAATTTGGTGAAAGATTGGCTGAGATTGAGAAAAGTTTGATAAGGAGGAATGAAGATGGGACACTGAGAAATAGGATTGGTCCAGTGATGGTGCCTTACACTCTGCTTTATCCTAGCAGTGAACCAGGACTTACAGGCAGAGGAATTCCAAACAGTATCTCTATTTGA 2538 0.4212 MTSTVISYTMVVTGPGADHLIMGSNFFGSKEPSPPRLDDQVAEKKAHVADLKSMKKYECHAPRKEKGTQQQQSYDFTFAWVVEKGIPEVFAHVVFGSDEIFLVSLTVHPIPNLTSEPLHFICNSWVYISNNTRLPRFFFINKAYLPSQTPGLVGVYRKVQLQCLRGEASEVEDAYGVRKEWDKIYEYATYNDLGNVDANPDLARPILGGSTQYPYPRRLRTGRAPSKNDPSTESRLPPENSFSIYVPKDDRFGDQKLFEFVQHFPKSTMNLMKSYISEALEASGKEFQSFEHVLKVLYQDGFTFNVPKAVLDHIAQAFPIPSPPDNGNLLLKFPIPSVIQDNLDGWMTDEEFAREMLAGVNPVLICLLQELPIKSTLDINLYGDHTSTITRQHLEKNMNGLTVYEALNSKRLFILNHYDAFMPYLRKINGTSRKAYASRTILFLQNDGTLKPLAIELSLPHPDGDQFGAVSKVYLPETEGVEGTLWLLAKAYVVVNDTGYHQLVSHWLNTHAVMEPFVIATHRQLSQLHPIHKLLHPHFHDTLFINALARQNLISADGIIEDSFLPGKYSMEMSSVVYKSWNFLEQALPADLIKRGMAVEDPSAPHGLRIVIEDYPFAVDGLLIWDALNTWVYDYVTYYYESDEILKQDPELQSWWKELVEVGHGDLKAEPWWPKMQTRQELIHSCTIIIWIASALHAAVNFGQYPYGGYILNRPTLSRRLVPEKGTEEYEEMVKNRELAFLKTIAPKFETLLDLSIIEILSGHTTDEVYLGTRTIPYWTYDKKVLEDFKKFGERLAEIEKSLIRRNEDGTLRNRIGPVMVPYTLLYPSSEPGLTGRGIPNSISI 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1869 845 Gene3D PLAT/LH2 domain 36 144 - -
Alju05g1869 845 Gene3D - 145 255 - -
Alju05g1869 845 PRINTS Lipoxygenase signature 501 518 IPR013819 GO:0016702|GO:0046872
Alju05g1869 845 PRINTS Lipoxygenase signature 521 541 IPR013819 GO:0016702|GO:0046872
Alju05g1869 845 PRINTS Lipoxygenase signature 483 500 IPR013819 GO:0016702|GO:0046872
Alju05g1869 845 SUPERFAMILY Lipoxigenase 145 845 IPR036226 -
Alju05g1869 845 Gene3D - 479 844 - -
Alju05g1869 845 ProSitePatterns Lipoxygenases iron-binding region signature 1. 501 515 IPR020833 GO:0016702|GO:0046872
Alju05g1869 845 MobiDBLite consensus disorder prediction 225 239 - -
Alju05g1869 845 FunFam Lipoxygenase 345 478 - -
Alju05g1869 845 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 143 845 IPR013819 GO:0016702|GO:0046872
Alju05g1869 845 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 65 144 IPR036392 GO:0005515
Alju05g1869 845 PRINTS Plant lipoxygenase signature 370 389 IPR001246 GO:0016491
Alju05g1869 845 PRINTS Plant lipoxygenase signature 181 197 IPR001246 GO:0016491
Alju05g1869 845 PRINTS Plant lipoxygenase signature 331 347 IPR001246 GO:0016491
Alju05g1869 845 PRINTS Plant lipoxygenase signature 758 772 IPR001246 GO:0016491
Alju05g1869 845 PRINTS Plant lipoxygenase signature 214 233 IPR001246 GO:0016491
Alju05g1869 845 PRINTS Plant lipoxygenase signature 436 460 IPR001246 GO:0016491
Alju05g1869 845 PRINTS Plant lipoxygenase signature 110 128 IPR001246 GO:0016491
Alju05g1869 845 Gene3D - 344 478 - -
Alju05g1869 845 Pfam Lipoxygenase 156 828 IPR013819 GO:0016702|GO:0046872
Alju05g1869 845 Gene3D - 256 343 IPR027433 -
Alju05g1869 845 FunFam Lipoxygenase 480 844 - -
Alju05g1869 845 MobiDBLite consensus disorder prediction 209 241 - -
Alju05g1869 845 PANTHER LIPOXYGENASE 57 845 IPR000907 GO:0016702|GO:0034440|GO:0046872
Alju05g1869 845 ProSitePatterns Lipoxygenases iron-binding region signature 2. 528 538 IPR020834 GO:0016702|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1869 Alju-ChrAlju05 50749166 50755441 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1869 68 845 Acyl Lipid Metabolism Gene Families AT1G55020 55.102 0.0 870