Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1865 ATGACTACCCTTTTGCTATGGATGGACTTGAGATATGGGCTGCCATTAATACATGGGTTGAAGAGTACGTTTGTTGCTACTATGAGACTGATGACACTATTAGAGGCAGACTCTGAACTACAAGCTTGGTGGAAAGAACTTGTGGAAGTTGGTCATGGAGATTTGAAAGACAAGCCATGGTGGCCTAAGATGCAAACACGTAATGAACTTATTGAATCTTGCACTATTGTCATATGGACAACTTCAGCTCTTCATGCTGCTGTTGACTTTGGCCAATATCCTTATGGAGGTTATATTCTGAATTGTCCAACATTGAGAAGAAGATTGCTTCCTGAAGAAGGGGAATACAAAGAAATGAAGAACCCGGAGAAAGCTTTCTTGAAGACAATAACTCCAAAGATTCAGACCCTAATTGACCTATCAGTGATCGAGATATTGTCAAGGCACACTTCTGATGAGGTCTATCTTGGAACAAGAGACAGTCCTGACTAG 492 0.4106 MTTLLLWMDLRYGLPLIHGLKSTFVATMRLMTLLEADSELQAWWKELVEVGHGDLKDKPWWPKMQTRNELIESCTIVIWTTSALHAAVDFGQYPYGGYILNCPTLRRRLLPEEGEYKEMKNPEKAFLKTITPKIQTLIDLSVIEILSRHTSDEVYLGTRDSPD 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1865 163 PANTHER LIPOXYGENASE 35 159 IPR000907 GO:0016702|GO:0034440|GO:0046872
Alju05g1865 163 Pfam Lipoxygenase 33 162 IPR013819 GO:0016702|GO:0046872
Alju05g1865 163 Gene3D - 32 163 - -
Alju05g1865 163 SUPERFAMILY Lipoxigenase 34 162 IPR036226 -
Alju05g1865 163 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 34 163 IPR013819 GO:0016702|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1865 Alju-ChrAlju05 50664906 50665397 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1865 34 161 Acyl Lipid Metabolism Gene Families AT1G55020 64.885 1.87e-55 184