Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1859 ATGGGACTACGTAGATTAAGAGCAAAGATTAAAAGGAGCCATCTTTACACATTTGCTTGTCTTAGGCGGACTCACACTGCACCTCAGAATGCTCTAAACCTTCAAGGTCCTGGCTTTTCAAGAGTTGTACATTGCAACCACCCTCAACCCCCTGAAAAGAAGTCTCAGTTTTACTGCCGGAATGACATATCAACGACAAAATACAATGTTGTAACATTTTTACCTAAGGCACTCTATGAGCAATTTCGACGGGTTGCTAATATATACTTCCTTGTGGTGGCATGCCTCTCAGCCTCTCCAATCTCACCATTCTCTCCAATCAGCATGATTGCTCCTTTGGTATTTGTTGTTGGGCTTAGTATGGCAAAGGAAGCATTGGAAGATTGGCGCAGGTTTCGTCAGGATGTCAAAGTTAATCACCGGAAAGCTAGTGTCCATGAAGGCAATGGCGTTTTCGCTCTCAAGCAATGGCAGGACATTGTAGTTGGGGATGTAGTAAAAGTAGATAAGGATCAATTTTTTCCTGCTGATTTGCTTTTCTTGTCATCAAGTTATGAGGATGGGATATGCTATGTGGAAACTATGAATTTAGATGGTGAGACAAACCTAAAGGTGAAAAGATCTTTGGAGGTTACCATGCTTCTATATAATGATGAATCTTTCAAAGATTTCTCAGGAATAATTCGTTGTGAAGACCCAAATCCTAGTCTCTACACATTTGTTGGAAATTTTGAGTATGAACGTGAGGTTCATCCAATTGAGCCCAGTCAAATTCTCCTCCGAGATTCAAAGCTCAGGAACACTGATTTCATATATGGAGTGGTCATTTTCACTGGTCATGAAAGCAAAGTGATGCAGAATTCTACAAAATCTCCGTCAAAAAGGAGCAGAATAGAAAGAAAGATGGATTATATCATATATCTTCTATTCACTGTTCTTATTTTGATATCCTTGGTCAGTTCAGTAATATTCTCTATAATCACTAGATTCCAAACAATAAATTGGTGGTATTTAAAACCCATGCAATCAGATGTCCTGTATGATCCCAATAATGCTGCATTGGCTGGGTTGAGTCATCTGGTTACTGCACTCATTCTTTATGGATATTTGATACCCATATCACTTTATGTTTCAATTGAGGTTGTGAAGGTTTTGCAAGCAAACTTGGTTGAACAAGACTTGCACATGTATCACGAAGAAACTGGCACTCCAACTCGTGCCCGAACATCAAATTTGAATGAAGAGTTGGGTCAAGTGGACACTATACTTTCTGATAAGACTGGAACTTTGACTTGCAATCAGATGGATTTTTTAAAGTGCTCCATCGCTGGTGTTGCATATGGTGTGAGTTCCAGTGAAGTTGAACTTGCTACGGCACAGCAGATGGCCCTTGAACTTGAGGAGGACCAGCAGGAGGATCTCTCCAATTCACCCACACATAAGGTTAAGGCATCTGTTTCATGGGAAAATGTTGACCTGGAGACTGTTGTTACTTCCAAGGGTGATGAGGCTCAGAAGGCTACTACAAAGGGTTTCAGATTTGAGGACGTTCGCCTCATGAACTGTAACTGGTTGAAGGAGTCCAATTCCGATGTCCTTTTATTGTTTTTTCGAATATTAGCTGTTTGCCATACTGCCATTCCTGAGCTGAATGAGGAGACAGGAGCTTTAACTTATGAGGCTGAATCCCCTGATGAAGGGGCTTTCTTAGCAGCATCAAGAGAATTTGGTTTTGAGTTTTGTAAAAGAACTCAAGCAAGTGTTTTCATCCGCGAAAATCTTTCACCTTCAGAACAAGCTGTTGAAAGGGAGTACAAAATCTTGAATCTATTGGACTTTACTAGCAAAAGAAAGCGAATGACAGTGATTGTGCGTGATGAGGAGGGAAGTTTACTTCTTATGTGCAAAGGGGCTGACAGTATCATATTTGATCGACTATCAAAGAATGGAAAGACATATTTAGATGCTACAACCAAACATTTGAACGAATATGGAGAAAATGGTTTGAGAACATTGGCTCTAGCTTACAGAAAGCTTGATGAGGAAGAGTACAAAGCTTGGAATAATGAATTTCAGAAAGCCAAAACTACTGTTGGGCCTGACAGAGAGGAAGCGCTTGAGGAATTAGCTGAACAAATGGAAAAAGAGCTGATTCTTGTTGGGGCTACTGCTGTGGAAGACAAACTGCAAAATGGGGTTCCCCAATGCATTGATAAACTTGCACAAGCAGGTCTCAAGATCTGGGTTTTGACCGGGGATAAGATGGAAACTGCAATCAACATCGGTTTTTCTTGTAGTTTGCTTCGACATGGCATGAAGCAGATCTGCATATCTATTCCAGAGTCAGACTCAGTTACCAGTTTTGACAAAGAGGCCATTAAGGAGGGCATTTTGAATCAAATCATCAATGCCTCACAAATGGTAAAGCTGGAGACAGATCCACATGCTGCATTTGCATTAATTATTGATGGGAAGGCTCTGGCTTATACTTTAGAAGAAGATATGAAGCATCAATTTTTGGGATTGGCTGTTGATTGTGCCTCTGTCATCTGCTGTCGTGTGTCTCCCAAGCAAAAGGCATTGGTAACAAGGTTAGTTAAAGAAGGCACTGGGAAGACCACTTTAGGAATAGGTGATGGTGCAAATGACGTTGGCATGATACAAGAAGCAGATATTGGTGTTGGTATTAGTGGGGTTGAAGGTATGCAGGCAGTGATGGCTAGTGACTTCTCAATCGCTCAATTTAGATTTTTGGAACGACTTTTGGTAATCCATGGACACTGGTGCTACAAGAGAATAGCTCAAATGATATGCTATTTCTTCTACAAAAACATAGCTTTTGGTCTCACCATCTTCTATTTTGAGGCCTTGACGAGCTTCTCTGGGCAATCAGTTTATGATGACTGGTACATGATATTGTTCAATGTTGTTCTTACATCATTACCTGTCATTTCACTTGGAGTATTTGAACAAGATGTTCCATCAGAAGTTTGCTTACAGTTTCCTGCACTATATCAGCAAGGCCCAAGAAATCTGTTATTTGACTGGTTTAGAATACTGGGATGGATGCTCAATGGTCTATTTTGCTCCCTCGTTGTCTTCTTATTCAACATCTGCATTTTTTATGACCAAGCCTTCCGAGGTGATGGCCGGACCCCGGACATGGCTGTTGTCGGTACCACAATGTTCACTTGCATCATTTGGGCTGTCAACTGCCAGATTGCCCTCATCATTTGCCATGTCACTTGGATGCAATACATATTTATCATAGGGAGTATAGCCTGTTGGTACGTAGTCTTAGTGCTATATGGCATGCTTTCGCCGACCTATTCAAAAACCGCCTACCAAATCCTGCTTGAAGTTCTTGCTCCTGCACCAATGTATTGGTTGGCCACTTTTCTAGTAACAGTTACTTGTAATTTTCCTTACTATGCCCATATATGCTTTCAAAGATGGAAAAATCCCTTGGATCATCACATTATCAGAGAGATCAAGCACTTCAAGATGGACGAAGAGGACCAACGCATGTGGAAGAGGGAAAGGTCTAAAGCAAGACAGAAAACCAGTATTGGATTCAGTGCAAGAGTGGAAGCTAAGATGAGAAATTTGAAGCAGAAGCTTCAGAAGAAGCAATCAACCTTGCCTTTCATGCCTTCTCCAGATGAAATTTACAAATAA 3678 0.4097 MGLRRLRAKIKRSHLYTFACLRRTHTAPQNALNLQGPGFSRVVHCNHPQPPEKKSQFYCRNDISTTKYNVVTFLPKALYEQFRRVANIYFLVVACLSASPISPFSPISMIAPLVFVVGLSMAKEALEDWRRFRQDVKVNHRKASVHEGNGVFALKQWQDIVVGDVVKVDKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRSLEVTMLLYNDESFKDFSGIIRCEDPNPSLYTFVGNFEYEREVHPIEPSQILLRDSKLRNTDFIYGVVIFTGHESKVMQNSTKSPSKRSRIERKMDYIIYLLFTVLILISLVSSVIFSIITRFQTINWWYLKPMQSDVLYDPNNAALAGLSHLVTALILYGYLIPISLYVSIEVVKVLQANLVEQDLHMYHEETGTPTRARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGVAYGVSSSEVELATAQQMALELEEDQQEDLSNSPTHKVKASVSWENVDLETVVTSKGDEAQKATTKGFRFEDVRLMNCNWLKESNSDVLLLFFRILAVCHTAIPELNEETGALTYEAESPDEGAFLAASREFGFEFCKRTQASVFIRENLSPSEQAVEREYKILNLLDFTSKRKRMTVIVRDEEGSLLLMCKGADSIIFDRLSKNGKTYLDATTKHLNEYGENGLRTLALAYRKLDEEEYKAWNNEFQKAKTTVGPDREEALEELAEQMEKELILVGATAVEDKLQNGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFSCSLLRHGMKQICISIPESDSVTSFDKEAIKEGILNQIINASQMVKLETDPHAAFALIIDGKALAYTLEEDMKHQFLGLAVDCASVICCRVSPKQKALVTRLVKEGTGKTTLGIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFSIAQFRFLERLLVIHGHWCYKRIAQMICYFFYKNIAFGLTIFYFEALTSFSGQSVYDDWYMILFNVVLTSLPVISLGVFEQDVPSEVCLQFPALYQQGPRNLLFDWFRILGWMLNGLFCSLVVFLFNICIFYDQAFRGDGRTPDMAVVGTTMFTCIIWAVNCQIALIICHVTWMQYIFIIGSIACWYVVLVLYGMLSPTYSKTAYQILLEVLAPAPMYWLATFLVTVTCNFPYYAHICFQRWKNPLDHHIIREIKHFKMDEEDQRMWKRERSKARQKTSIGFSARVEAKMRNLKQKLQKKQSTLPFMPSPDEIYK 1225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1859 1225 Gene3D - 433 470 IPR023299 GO:0000166
Alju05g1859 1225 Gene3D - 586 719 IPR023299 GO:0000166
Alju05g1859 1225 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 30 1175 - -
Alju05g1859 1225 Pfam Cation transport ATPase (P-type) 542 647 - -
Alju05g1859 1225 FunFam Phospholipid-transporting ATPase 119 289 - -
Alju05g1859 1225 PRINTS P-type cation-transporting ATPase superfamily signature 423 437 - -
Alju05g1859 1225 PRINTS P-type cation-transporting ATPase superfamily signature 877 896 - -
Alju05g1859 1225 Gene3D - 720 917 IPR023214 -
Alju05g1859 1225 Coils Coil 1193 1213 - -
Alju05g1859 1225 SFLD Haloacid Dehalogenase 407 928 - -
Alju05g1859 1225 SUPERFAMILY HAD-like 411 921 IPR036412 -
Alju05g1859 1225 ProSitePatterns E1-E2 ATPases phosphorylation site. 425 431 IPR018303 -
Alju05g1859 1225 Gene3D - 119 289 - -
Alju05g1859 1225 NCBIfam phospholipid-translocating P-type ATPase 58 1163 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Alju05g1859 1225 Pfam Phospholipid-translocating P-type ATPase C-terminal 905 1155 IPR032630 -
Alju05g1859 1225 SUPERFAMILY Calcium ATPase, transduction domain A 146 287 IPR008250 -
Alju05g1859 1225 Gene3D - 420 432 IPR023214 -
Alju05g1859 1225 MobiDBLite consensus disorder prediction 1205 1225 - -
Alju05g1859 1225 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 519 683 IPR023299 GO:0000166
Alju05g1859 1225 SUPERFAMILY Calcium ATPase, transmembrane domain M 53 1153 IPR023298 -
Alju05g1859 1225 FunFam Phospholipid-transporting ATPase 587 718 - -
Alju05g1859 1225 NCBIfam HAD-IC family P-type ATPase 849 958 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Alju05g1859 1225 FunFam Phospholipid-transporting ATPase 720 917 - -
Alju05g1859 1225 Coils Coil 449 469 - -
Alju05g1859 1225 Pfam Phospholipid-translocating ATPase N-terminal 43 110 IPR032631 -
Alju05g1859 1225 CDD P-type_ATPase_APLT_Dnf-like 60 1036 - -
Alju05g1859 1225 SFLD p-type atpase 407 928 IPR044492 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1859 Alju-ChrAlju05 50586174 50591705 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1859 1 1223 Primary Pumps ATPases AT1G17500 70.237 0.0 1812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju11g0538 11 5796981 5802887 Alju05g1859 05 50586174 50591705 CCT