Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1852 ATGGCCTCTGCTTCGTCAAGCTTTGGCTTTGAGCCAAATGCTCCAAGAGAGTATGATGTGTTTATCAATTTTAGTGGCCAAGACACCCGCAACAACTTCACTAGCCATCTTCGTACTGATCTCAACCGATTTTTCGTTGTGACCTTTCGTGATGATAAGCAGCTCGAGATAGGTGATGAGATCGCACCATCACTCATTCAAGCAATCAAGGATTCAAGTGTATCTGTAATAGTCTTCTCAGAACACTATGCTTCCTCAAAATGGTGCCTGGATGAACTCCACCAGATCATGCTATCTAGAAAGGATGAGGGCCAGTTTGTGATACCCATCTTCTATAAAGTTGACCCCAGAGATGTCCGAAACCAGACCGGAGCAGCTTATGAGGAGGCATTTGAAAAACATGAGATTGCTTATCAACAAGACCCAGACAAGGTGAAGAGATGGAGAGCTGCTCTTTCTGAAGCTGGCAAATTAAGCGGTAGGCACTGCCAAACCTCCACGGATGAATCAAATTTAGTTGAACAAATTGTCGATGATGTCTGGAAGAAACTGGAACGTCTACATAATTGTCATGGTACATTAAAGGATGTATTTGGAATTGATCAAATGGTTAAACCCATTGAAGAGTTACTAAAAAAATCTCACAAAGTTGGAATTTGGGGGATGGGCGGTGTGGGTAAGACCACAATGGCAAAAGTTGTGTTTGCCACATTATCTTCTCAGTATAACCATCGCTGCTTCTTGGAAAATGTAAGGGAGGAAACAGAAAGAAAGGGATTAAAACATGTACGTGACTCTCTTGTCTCAAAGCTACTAGGGAAAGATATGCAAATTGACTCATCAAACGAGGAATTTGTTGTTGGAAGGCTTGGTAGGACAAAGGCTTTTGTTGTGCTGGATGATGTTGATACTACTGAGCAATTAAAGAATCTGCAGGATGACACATGCAATTTCTTGGGAAAGGGTAGTAAAGTTATTATAACAACAACAGATCAGAAATTGCTTCGGGGAAAGGGTTATGAAATACACGAAGCTAAGGGATTGAGTTATGAGAATTCACGTCGACTTTTCATCCGCAAGGCCTTTGGATCAGACAATGCAGAAGATGGATATGAAGAGCTTATAAAAGGGTTTGTCGATTATACCAAACACAATCCCCTAGCTTTGGAAGTTTTGGGTTTATATGTTCACTCTGAAGATAAAACTTTGTGGGGTGATTTTTTGAGAAAACTACAGGCAGGGAATCCAAATAAGAAAATTCAAGAGGTGTTAAGTTTGAGTTACAATAGATTAGACCATCAAGAGAAGCAAATTTTTCTAGACATCGCATGTTTCTTAAAGGGTGAAAGTGAAGAATTTGTAAAAGAGCTAATGGAGAGCTATGGATTCTATCCAACCGTTGGCATGCAAATCCTTAAAGATAAGGCTCTTATTTTCACGAACAATGGGAAAGTTGAAATGCATGACTTGATACAGAAAATAGGTCATCAAATTGTTCGTGAAGAGAGTATCAAGGAACCTGGAAAAAGGAGTAGATTATGGGATTCTACCATAATCTCTGATGTGTTGGCAAAATGTGAGGGAGAAAAAGAGGTTGAAGGCATAATGTTGGGTGCAAATGAGAAAATAGGAGCTTTGAAATTGACCGCTAAGACCTTCAAAAAAATGACGGGATTGAGATTTCTCAAAATTCATTCATATTGGGAGTATGATGAGAGTACTTCTGCAATAGTTCTAGAGTCATTTTCTACCAAAATAAGGTATTTCCACTGGAAAGGCTACCCGATGAAGTCCTTGCCATCAAATTTTTACGCTGAGCATCTTCTTGAACTTAACTTGAGAAGCGGAAAGGTAGAAACACTCTGGGAAGGTGTGCAGGATTTGGTGAATTTAAGAAGATTAAAACTCAAATGGTGTCGTAACTTGAGGGGGTTACCAGATTTTTCTAAGGCTTGTAGGCTTGAAAGCGTAGATCTGAGTCATTGTGAGAGTTTGTGTTATGTGGATGCATCTCTCCTATCCCTTCACAGTCTCATTTCTTTGGATGTAAGCGGCTGCACTAGCCTTGAGAGTCTCCAAAGTAGGATTCATCTAAAATCTCTCAAACAAATCAACATAGATGGGTGCAAGAAGATCAAGGAATTCTCCGTGTCGTCAGAAGAACTAACGTCTTTAGATTTATCTTTCACTGAGATAGAAGAATTGAGCCCATCAATTGGGCGTTGTTCAAAGCTTACAACACTCCATCTCCTTTATACAAATTTGAAGAATCTTCCCATAAAGGTATTGAGTTGCTTAACATTTCTGAAGGAACTCTGCATTTTCCTCCGGCACATTGACAATGTCGACCTACGTGTGCTATTTGATCGTTTACATAGTCTCCAATCACTAAGTCTCCAGAGGTGCATGTACTTAACTGAGCTCCCAGATAACATCACCCAACTCTCCAGTCTGGAAAAGCTTTATTTGGTGAGGTGGCCCCGCCTAACTAAACTCCCCATCAATATGAGGCTTCTTTCAAAGCTACAAGTTCTCTCTGTAGCAAGCTGCACTGCCCTTCATAGTCTACCGGAACTTCCTCCCTCCCTTAGAAAATTGAATGCCACATACTGCCCATCTTTGGAGACAGTGTCCCCTTCAACTATTTCAAGCACACTTCAGAATTATGGTGAAAAGTTCTTCTCATTCACCAACTGTGTGAAATTAAATTTGGGCGCCATTGAAGAACAAGCCAAGTTGTTGTTAGAGAAAGCGGTTCATGAGAAGGAAGATGTTGTAGTATATTACCCGGGGCAGAAGGTTCCAGAGTGGTTTGGGAATAATCGGACCCAAAATGATTCGGACACCCTCAAACTTTGTCTATCTTCTCACACTTTAGTGGGTTTCGTTTTTTGTGCCATCGCTCCTGACTTCCTTGAAGGAGAACTCTCTGGATATCTTCATATTGCCTTCAGCGATAAAGAGGATGAAATGACTGAAGAAGTAGTTGAGTTTCCAGAATTAACATATTTCACATATGGAAATGTTCTCCTATGTTCTTATCTAAAAGCATCCGAATCGATCCTGGAGAAAATTGAAGGCAAGAGAAGAAATCATGATGCCACCACTTATAACCCAAATCTTTCCTTCAAATTCAGTTTTGATGATGGCTTTTCTTCTCATCCCGCCGAAGAGTGTGGAGTGCAAGGCCGTAATGATTTAATTAAAAGCGCTGGATCTTTGTACCAAGGAACTCAAATGGCGGTTATGGTCTTGCGGGTACGTTTCTTTGAATCAGCTTATGATGACAAAGTAGAGACTTTGAAAACAAAGCATGAAGGAAACGTGCCATAA 3333 0.4047 MASASSSFGFEPNAPREYDVFINFSGQDTRNNFTSHLRTDLNRFFVVTFRDDKQLEIGDEIAPSLIQAIKDSSVSVIVFSEHYASSKWCLDELHQIMLSRKDEGQFVIPIFYKVDPRDVRNQTGAAYEEAFEKHEIAYQQDPDKVKRWRAALSEAGKLSGRHCQTSTDESNLVEQIVDDVWKKLERLHNCHGTLKDVFGIDQMVKPIEELLKKSHKVGIWGMGGVGKTTMAKVVFATLSSQYNHRCFLENVREETERKGLKHVRDSLVSKLLGKDMQIDSSNEEFVVGRLGRTKAFVVLDDVDTTEQLKNLQDDTCNFLGKGSKVIITTTDQKLLRGKGYEIHEAKGLSYENSRRLFIRKAFGSDNAEDGYEELIKGFVDYTKHNPLALEVLGLYVHSEDKTLWGDFLRKLQAGNPNKKIQEVLSLSYNRLDHQEKQIFLDIACFLKGESEEFVKELMESYGFYPTVGMQILKDKALIFTNNGKVEMHDLIQKIGHQIVREESIKEPGKRSRLWDSTIISDVLAKCEGEKEVEGIMLGANEKIGALKLTAKTFKKMTGLRFLKIHSYWEYDESTSAIVLESFSTKIRYFHWKGYPMKSLPSNFYAEHLLELNLRSGKVETLWEGVQDLVNLRRLKLKWCRNLRGLPDFSKACRLESVDLSHCESLCYVDASLLSLHSLISLDVSGCTSLESLQSRIHLKSLKQINIDGCKKIKEFSVSSEELTSLDLSFTEIEELSPSIGRCSKLTTLHLLYTNLKNLPIKVLSCLTFLKELCIFLRHIDNVDLRVLFDRLHSLQSLSLQRCMYLTELPDNITQLSSLEKLYLVRWPRLTKLPINMRLLSKLQVLSVASCTALHSLPELPPSLRKLNATYCPSLETVSPSTISSTLQNYGEKFFSFTNCVKLNLGAIEEQAKLLLEKAVHEKEDVVVYYPGQKVPEWFGNNRTQNDSDTLKLCLSSHTLVGFVFCAIAPDFLEGELSGYLHIAFSDKEDEMTEEVVEFPELTYFTYGNVLLCSYLKASESILEKIEGKRRNHDATTYNPNLSFKFSFDDGFSSHPAEECGVQGRNDLIKSAGSLYQGTQMAVMVLRVRFFESAYDDKVETLKTKHEGNVP 1110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1852 1110 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 442 IPR027417 -
Alju05g1852 1110 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 716 IPR044974 GO:0006952
Alju05g1852 1110 Pfam NB-ARC domain 205 428 IPR002182 GO:0043531
Alju05g1852 1110 Gene3D Ribonuclease Inhibitor 540 719 IPR032675 -
Alju05g1852 1110 Gene3D Ribonuclease Inhibitor 720 913 IPR032675 -
Alju05g1852 1110 Gene3D - 189 339 IPR027417 -
Alju05g1852 1110 Pfam TIR domain 18 187 IPR000157 GO:0007165
Alju05g1852 1110 Gene3D - 347 432 IPR042197 -
Alju05g1852 1110 SUPERFAMILY Toll/Interleukin receptor TIR domain 14 160 IPR035897 -
Alju05g1852 1110 SMART till_3 17 158 IPR000157 GO:0007165
Alju05g1852 1110 PRINTS Disease resistance protein signature 673 689 - -
Alju05g1852 1110 PRINTS Disease resistance protein signature 216 231 - -
Alju05g1852 1110 PRINTS Disease resistance protein signature 289 303 - -
Alju05g1852 1110 PRINTS Disease resistance protein signature 382 396 - -
Alju05g1852 1110 ProSiteProfiles TIR domain profile. 16 184 IPR000157 GO:0007165
Alju05g1852 1110 SUPERFAMILY L domain-like 487 879 - -
Alju05g1852 1110 Gene3D - 15 188 IPR035897 -
Alju05g1852 1110 FunFam Disease resistance protein (TIR-NBS-LRR class) 14 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1852 Alju-ChrAlju05 50410870 50415886 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1852 13 824 WRKY Transcription Factor Family AT4G12020 30.833 6.89e-88 310