Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1833 ATGACTCCAAAGAGAAACGACGCCGTTGGAACGGCGAGTGGTCGCATTCACGGTGACATCGACACACAATTGTCAAATCGGAGGGAGCGAAGATGGTTTAAATCCCTCATTTCTCATAAAAGGCCCTCCTCAAATGACCCTGTTGGCGAGAAGAGTAAGAAGAAATGGAGGCTATGGAGAAGTTCTTCAGAAGGTTTTGGATTTGGGTCCTCCACCAAAAACATGAAGAAGGGACGCGATGTTGCATCGGAGAGGTCTGATTCATCTACGTTTGTTGTGGATGATGAACTTGCTTCTGCCATGGCTACTGTGGCAATCCGAGCTGCTCCTAAAGATTTAATGCTAATCAAGCAGGAATGGTCTGCGATTCGCATTCAATCTGTGTTTCGAGGTTTCTTAGCTAGAAGAGCTTTGAGGGCATTGAAGGCAGTGGTGAGGCTGCAAGCAATATTTAGAGGAAGGAAAGTAAGAAAGCAAGCAGCTATAACACTAAGGTGCATGCATGCTCTTGTTAAAGTTCAGGCACGTGTAAGGGCTATGAATGTAAGAATGTCTCCAGAAGGGAAGGCTGTTCAGCAATTATTAGATGATTATCGCAGACAAGCTGCTGATCCTGTCAAGCAGGCTGAGGAAGGATGGTGTAACATTCCAGGAACGGTAGATGAAGTTAAAGCAAAGATACAATTGAAGCAAGAGGCAGTCATCAAAAGGGAGAGAGCTATGGCTTATTCTTTCTCTGCTCAGTCAAGAGTGAGTGGTAGTCCAAAATCAAGAGGCACAAAGACAGTGAACAGAAGCTTGTTAGAGCAATGGATGACGGTGAAGCCATGGGAAAGCAGGTTGATGGAAGAAGAAGGTACCTATTACGACTCACCTGAAATTACTCCTTTGTCCTTGAAAACCAATGACCTTGTTCATGAACAAATCAAAGCAAGAAGGAATGGTGTGACCACAACTATTTTCAATAGCTCTCTTATAGCAACAAGTCAATCGACTCTGACATCATTATCTTCAACCTCAAGTTCTGAATGCTGCACATTTGATGATAGTCCTGAATCATCAACTTCATACTCATACACATCCATGTCACAATCTGTACCATTTAGCAGCAATATTACTCTTCAGGAGGAAACAAGAGAGGGAAGGACTTTTCATAGACCTAGCTATATGAATCTGACAGAGTCAACAAGGGCCAAACAAAGAGCTTGTGGTTATGTTATGAATATGAGTGGAGATTGTAGAAGCATTTGTTCTGGTTCTGATCCTTGTGTTAATTTGTGGAAAGGTGTATGTGCAACACCTGAAAGGTTGTCTTGCCAAAAGAGAAACTTTGGGAAACAACAAAGGTTGGCTTAG 1356 0.4292 MTPKRNDAVGTASGRIHGDIDTQLSNRRERRWFKSLISHKRPSSNDPVGEKSKKKWRLWRSSSEGFGFGSSTKNMKKGRDVASERSDSSTFVVDDELASAMATVAIRAAPKDLMLIKQEWSAIRIQSVFRGFLARRALRALKAVVRLQAIFRGRKVRKQAAITLRCMHALVKVQARVRAMNVRMSPEGKAVQQLLDDYRRQAADPVKQAEEGWCNIPGTVDEVKAKIQLKQEAVIKRERAMAYSFSAQSRVSGSPKSRGTKTVNRSLLEQWMTVKPWESRLMEEEGTYYDSPEITPLSLKTNDLVHEQIKARRNGVTTTIFNSSLIATSQSTLTSLSSTSSSECCTFDDSPESSTSYSYTSMSQSVPFSSNITLQEETREGRTFHRPSYMNLTESTRAKQRACGYVMNMSGDCRSICSGSDPCVNLWKGVCATPERLSCQKRNFGKQQRLA 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1833 451 Pfam IQ calmodulin-binding motif 142 159 IPR000048 GO:0005515
Alju05g1833 451 Pfam IQ calmodulin-binding motif 120 139 IPR000048 GO:0005515
Alju05g1833 451 PANTHER IQ-DOMAIN 5-RELATED 32 402 - -
Alju05g1833 451 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 107 161 IPR027417 -
Alju05g1833 451 ProSiteProfiles IQ motif profile. 142 169 IPR000048 GO:0005515
Alju05g1833 451 Gene3D - 117 165 - -
Alju05g1833 451 ProSiteProfiles IQ motif profile. 118 146 IPR000048 GO:0005515
Alju05g1833 451 MobiDBLite consensus disorder prediction 1 23 - -
Alju05g1833 451 SMART iq_5 117 139 IPR000048 GO:0005515
Alju05g1833 451 SMART iq_5 140 161 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1833 Alju-ChrAlju05 49988049 49990890 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1833 32 427 IQD Protein Family AT1G72670 41.315 7.34e-82 257