Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1819 ATGGATTCTTCTTTTCTCATGGGTAGTACAATTTCAGAGCCTCGTGTTGATATGGAATTTGAATCGCATGAAGCGGCCTATGCATTTTATAAGGAGTATGCTAAGTCTGTGGGGTTTGGCACTGCCAAGTTGAGCAGTCGTCGGTCTAGAGCATCAAAAGAATTTATAGATGCCAAGTTTTCATGTATAAGATATGGTAATAAACAGCAATCTGATGATGCAATTAATCCTCGCCCATCTCCAAAAATTGGTTGTAAAGCAAGCATGCATGTGAAAAGAAAACCAGATGGCAAGTGGTATGTCTATAGCTTTGTGAAAGAGCATAATCATGAGCTTTTACCTGCTCAGGCTCATTTTTTCAGGAGCCATAGGAGTGGTGATCCACTTGGTAATGATGTTCGGATGCGAAGGCGGAAGAATTTAACTGCAGTTTCCAAATTATTTAATGCATATCAAAATGTTGATTGTTTAGAGAACTTTTTGAGAAATCTAAATGATAAGGGACGGAGTCTAGTTCTGGAAACTGGGCAAGCTCAATTGCTTCTTGAACTCATCATGCACATGCAGGAAGAAAATCCAAAATTCTTCTACGCCGTTGATTTAAATGAAGAGCATCGACTGAGAAATGTGTTCTGGGTTGACGCCAAAGGTGTGGAAGATTATACTTTTTTTGGTGATGTTGTTTCTTTCGACACAACATATTTCACCAGCAAGTATAAAATACCGTTGGTACTTTTTATTGGAGTAAACCATCATATGCAACCCACATTGCTTGGTTGTGCATTGATTGCTGATGAAACCAACTACACTTTTGCTTGGTTACTGCAAACTTGGCTAATTGCAATGGGGGGACGAGCTCCACAAGTGATTCTTACTGATCAAAATGAGGCCATGAAAACAGCTGTCGCAGCAGTTCTTCCTGGCACACGTCATTGTTTTTGTTTGTGGCATATTTTGGAAAAAATACCCAGACAGCTTGAATTTTTAGGTGCATGGCATGGTAATTTTATGGAAAAATTTAACAAATGTATATATAAATCATGGACAGAGGAACAATTTGAAAAGAGATGGTGGAAGCTGGTTGATAAATTTAATTTGAGAGATGTTGAATGGGTCCGATCCTTATACAATGATCGGACACGTTGGGTGCCAACTTTTATGAGAGGGATCTCTTTTGTTGGACTGTCCACTAGTTCTCGCTCAGAAAGTTTAAGTGCTTTGTTTGACAACTATGTCCAGTGTGACACTTCATTGAGAGAATTTATAGAGCGGTACAAAATGATTCTTGAAGAAAGGTATGAAGAAGAAGCCAAAGCAAATTTTGATGCTTGGCATGAAACACCAGAATTAAAATCTCCTTCCCCTTTTGAGAAACAAATGTTATACGTCTACACGCATGAAATTTTTAAGAAGTTCCAAGTTGAAGTTCTTGGCGCAGCTGCTTGCCATCTTAAAATGGAAAATGATGGTATGACCGCAACATATACTGTGAAGGACTTTGAAGATGATCAAAATTATGTGGTTGAGTGGAACAAATCTAACTCAGACATATGTTGCTCATGCCGCTCATTTGAATATAAAGGTTACCTTTGTAGACATGCTATTGTTGTTTTGCAAATGTCTGGGGTTTTCTGCATACCACCCAAGTATGTGTTGCAACGATTGACAAATGCTGCTATGAGCAAGCATCCTATCAGTGAAAGATTAGATGAGGTGCAATCTAAGGTCCGACGGCTCAATGATTTATGTAGACGGGCCATAATATTGGGTGAAGAAGGTTCTTTGTCCCAAGAAAGTTACTATATTGCTCTAGGTGCCATAAAAGAAGCGTTAAAGCAATGCACAAACATGAACTCTATTGAGAATGATACAAGACTTGATGCCCTAGTTACTCAAGTTTGCATTGTTGAAGAAGAGCATCAATCTGGTAATGCTTATAACAAGAAAGTTCCTGATCCAAGGATGACTACTGGTAATAAGGCTGCAAGGACTGCTGGGGCTGCTAGGGAAGTAGGAAGTGCGGAAAATACTGAAGGGAATAAAGGGAAGGCATCTCAACTAGAAGCAGTGGGCAGCCAAGATGGTTTTCACCAAATGGAACTGACAGATATGAGACAACATAATGTCATGCCTATGCAATTTCACAGTGTGGTGCCTTCTCTGTTCCATACATCAACACAGTATCATAACGCAGCTTCAACTCACTTGCCCGAGAATTGCCTTCCTCGTTAG 2232 0.3961 MDSSFLMGSTISEPRVDMEFESHEAAYAFYKEYAKSVGFGTAKLSSRRSRASKEFIDAKFSCIRYGNKQQSDDAINPRPSPKIGCKASMHVKRKPDGKWYVYSFVKEHNHELLPAQAHFFRSHRSGDPLGNDVRMRRRKNLTAVSKLFNAYQNVDCLENFLRNLNDKGRSLVLETGQAQLLLELIMHMQEENPKFFYAVDLNEEHRLRNVFWVDAKGVEDYTFFGDVVSFDTTYFTSKYKIPLVLFIGVNHHMQPTLLGCALIADETNYTFAWLLQTWLIAMGGRAPQVILTDQNEAMKTAVAAVLPGTRHCFCLWHILEKIPRQLEFLGAWHGNFMEKFNKCIYKSWTEEQFEKRWWKLVDKFNLRDVEWVRSLYNDRTRWVPTFMRGISFVGLSTSSRSESLSALFDNYVQCDTSLREFIERYKMILEERYEEEAKANFDAWHETPELKSPSPFEKQMLYVYTHEIFKKFQVEVLGAAACHLKMENDGMTATYTVKDFEDDQNYVVEWNKSNSDICCSCRSFEYKGYLCRHAIVVLQMSGVFCIPPKYVLQRLTNAAMSKHPISERLDEVQSKVRRLNDLCRRAIILGEEGSLSQESYYIALGAIKEALKQCTNMNSIENDTRLDALVTQVCIVEEEHQSGNAYNKKVPDPRMTTGNKAARTAGAAREVGSAENTEGNKGKASQLEAVGSQDGFHQMELTDMRQHNVMPMQFHSVVPSLFHTSTQYHNAASTHLPENCLPR 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1819 743 ProSiteProfiles Zinc finger SWIM-type profile. 506 542 IPR007527 GO:0008270
Alju05g1819 743 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 9 616 IPR031052 GO:0006355
Alju05g1819 743 Pfam SWIM zinc finger 507 540 IPR007527 GO:0008270
Alju05g1819 743 MobiDBLite consensus disorder prediction 666 686 - -
Alju05g1819 743 SMART 26again6 517 544 IPR006564 GO:0008270
Alju05g1819 743 Pfam MULE transposase domain 227 320 IPR018289 -
Alju05g1819 743 Pfam FAR1 DNA-binding domain 29 114 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1819 Alju-ChrAlju05 49673948 49676469 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Alju05g1819 MULE 3.8e-28 CL0219