Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1802 ATGAACATTTCCCAACGCAACACCAACAACAACAACAACATTAACAACAATCTTCACAACAACAACAACCAGGCTTGTGCTGCATGCAAATACCAACGTAAAAAATGTGCCCCTGACTGTATTCTCGCACCTTATTTTCCTCACGATCGCCAAAGTCAATTCTTAAACGCCCATAAATTGTTTGGCGTTAAAAAGATCACCAAAATTATCAAACACCTCGACCCCCGCAATAAGGACGAAGCCATGCGATCCATCATATTTCAATCCGACATGCGAGCTAATGACCCTGTTGGAGGATGCTACAGATACATTCAAGATCTCGAATCTCAGATAAGATATTACCAGGCCGAGTTCAAGCTTGTTCTTCAACATCTTGCTGTTTTTAGATCTCAGGCTCATTATCCTCATCATCATCATGATCATTTGAATCATGTTCATAATAATAACCCTATTACACCATTACCATCACCCACTCATTATCAATACCTTCAATGTCAACAACAACAAGAGCAGCCGCCGCCGCCGTATATGGTTCATCAAATGGAACATCAGAATAGTGATATGTCTTTTCAGGATGATGTTAGTGCTTGTTGGGCTTCCGTACAGGACTCCATGTCTTTGTCGTCTTTATCGTTACCGAACAACAAGAATGGTGGGGCTGGGGATGATATAAGTGGTGGCGTTTATGTAGGTGATGAATTGTGTCACGGTCAAAAGTCTTCTTCGATGTCTTTGCTTGACATTCATTGTGATGATGAGAGGAATGAAATCGATTTTGAAACTCAAGAATTAGTGGATCGCAGTGATGAGGGGGTTTTGTTTAAGATAGAGAATGCAGTAATAAAAGCAGAGGCTGATGATGATTGCATTCAACAAGATCGAGATCATGATCTCAAAGGTGCAGCAACTTTGTTCACTCTCACAAATTTTTGCAGGAGGATTTGCAAACATGGGTCCTCAAATCGTGCTTCTAGTGATGAAGAGGAAGCTGAAGAGAAGGTGATGCTCCTCAGATCTGGCCCCCGGGAACTTCAACTCGCCGTCTCTTCCTCATCGTCTCTCATCGAACAGGTCCAGAAGTTATCGGCTATGGAGGTCTTTGAAGGAGGACTTGCAAACATGGGTCCTCAGATCTTATTTCTAGTGATGGAGAGGAAGCCGAAGAGAAGGCGATGCTCCTCAGGTCTAGCCCCAGTGAGCTTCAATCGTCAGTGTCACATCATCAACGTCGCCAAATATCTGCTGACTATAAGCCATAGCGGGAGACAAAAGGAGGCGGGATGCCAAAAATCCGGTCATAAAATTGCAGGGAGATCGCCTTGTGGGTTGTGCTCGCCGGCGGTGGTTTGGGCTTACAGTGAGTTGCTAGCGACTGCATGGAAGGAAGATGGAAGAAAAGCCACCGTTGAGCCTCCCGGGTTGCTGAGCATGGTTAAGTGTTGGTGGCTAAGCATGGCTGAAAAGGGAGAGGGTAATGTGGGAAATGGGAACATGGCATTACACAACTGA 1509 0.4467 MNISQRNTNNNNNINNNLHNNNNQACAACKYQRKKCAPDCILAPYFPHDRQSQFLNAHKLFGVKKITKIIKHLDPRNKDEAMRSIIFQSDMRANDPVGGCYRYIQDLESQIRYYQAEFKLVLQHLAVFRSQAHYPHHHHDHLNHVHNNNPITPLPSPTHYQYLQCQQQQEQPPPPYMVHQMEHQNSDMSFQDDVSACWASVQDSMSLSSLSLPNNKNGGAGDDISGGVYVGDELCHGQKSSSMSLLDIHCDDERNEIDFETQELVDRSDEGVLFKIENAVIKAEADDDCIQQDRDHDLKGAATLFTLTNFCRRICKHGSSNRASSDEEEAEEKVMLLRSGPRELQLAVSSSSSLIEQVQKLSAMEVFEGGLANMGPQILFLVMERKPKRRRCSSGLAPVSFNRQCHIINVAKYLLTISHSGRQKEAGCQKSGHKIAGRSPCGLCSPAVVWAYSELLATAWKEDGRKATVEPPGLLSMVKCWWLSMAEKGEGNVGNGNMALHN 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1802 502 Pfam Lateral organ boundaries (LOB) domain 25 120 IPR004883 -
Alju05g1802 502 ProSiteProfiles LOB domain profile. 24 125 IPR004883 -
Alju05g1802 502 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 22 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1802 Alju-ChrAlju05 49413522 49417322 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1802 24 142 AS2 family AT3G13850 67.227 4.19e-51 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Alju05g1802 LOB 1.7e-34 No_clan