Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1797 ATGAACGTTGTTCGCAACACCAATAATAATACCATCAACAACCATAATCAAGCTTGTGCTGCTTGTAAATACCAACGTAAGAAGTGTGCTCCTGACTGTATTCTCGCTCCTTATTTCCCTCACGATCGCCAACGTCAATTCCTCAACGCCCATAAATTGTTTGGTGTCCGTAACATCACCAGAATTATTGAAAACCTCGACCCTCACAGTAGAGACGAAGCCATGCGAAGCATCATTTATCAATCTGACATGCGAGCCTCCGATCCCGTTGGAGGTTGTTACAGACACGTTCAAGAACTCATGGCCCAGATTCAATACTATGAGGCTGAACTCGAGCTAGTTCTTCAACAACTTGCTGCATTTCGTGCCCAAGCTCGTCGTCATGTTCATCCTAATCGTCATGAGATTGTTGATACTACTCCCAATCATTCAAGCTTATATAGCCCTAATAATGTCATTGCACCAGTGCCATCACCACTTTCTCATTATCAATACGTTCAACAACAACAAGAGCCCATGAACATGGCGGTAGTTAACAACGGTCATCAGGATCATCGCAGAAATAATAATAATAATAATAATAACGTTCCAAATAATTTGCATCTGGATGATGTTAATTATTGGCTTGCCCAGGATACCATGTCTTTATCGTTGCAGAACAAAAATGGTGGGGATGAACATATTGGTTATGTGGAAGATGAATTGGATAATGATCATAAGCCTTCTTTGTCATCTTTGCTCAACATTGATCGTGATGACAGGTTTTGA 768 0.4102 MNVVRNTNNNTINNHNQACAACKYQRKKCAPDCILAPYFPHDRQRQFLNAHKLFGVRNITRIIENLDPHSRDEAMRSIIYQSDMRASDPVGGCYRHVQELMAQIQYYEAELELVLQQLAAFRAQARRHVHPNRHEIVDTTPNHSSLYSPNNVIAPVPSPLSHYQYVQQQQEPMNMAVVNNGHQDHRRNNNNNNNNVPNNLHLDDVNYWLAQDTMSLSLQNKNGGDEHIGYVEDELDNDHKPSLSSLLNIDRDDRF 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1797 255 Pfam Lateral organ boundaries (LOB) domain 18 113 IPR004883 -
Alju05g1797 255 Coils Coil 97 117 - -
Alju05g1797 255 ProSiteProfiles LOB domain profile. 17 118 IPR004883 -
Alju05g1797 255 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 16 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1797 Alju-ChrAlju05 49389111 49389878 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1797 17 170 AS2 family AT3G13850 57.595 1.34e-54 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Alju05g1797 LOB 9.9e-36 No_clan