Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1796 ATGTCGGCTTCACCCTCTTCACTCTCTTCTCCAGCAAAAATTTCCTCGTCTTGTCGTCGTCGCTGGTCTGCCAAAGGATTCTGTGACGGCGGCTTCTGTCTGTTGATCACCGGTGAGAAGCGTGGCGGTGGTTGTCCGTGGCTAGAAGGTGTCTCACGGCGTTCTTGCATCTTCTTCTTGTGCTCTGTTTTTTGCTTGTTCAGGAATCAGATCTGGTGGCCTCCAATTGCCACTGCCAGTACCATGAGCCTCTTTCAGAACTCCGACACCAACGGTAACCACAACGACAATCAGGCTTGTGCTGCTTGTAAATTCCGTCGTAGGAAGTGTGCTCCTAATTGCATTTTCGCCCCTTATTTTCCTCACTATCGCCAAAGTCAATTCCTCAACGCCCATAAATTGTTCGGTGTTCGAAACATCACCAGAATGATCCAAAAACTTGACCCTCATCACAAGGACGATGCCATGCGAAGTTTCATTTTTCAATCAGACATGCGAGCTAATGACCCAGTCGGAGGTTGTTACAGATACATGCAGGAGCTTGTAGCTCAGATTGAATACCATGGAGCTGAACTCGACCTTGTTCTTCAACAACTCGCTGTTTTTGGACCTCATCAACCTCCTAATAATAATATCAATGTCAATGCGGACGATGATCATCATTTGAATCATGAACATCGTGACAATATTGATGCTCCTAATTTGCAGGATGATGTTAATTCTTGGGACGGTCAGGAGTCACTGTCTTTGTCGTTTGACGATGATGATGAGAGTAATGCTGATTATGTCGGTGATGAATTGTACGATAATCAGAAACCTATGGCTTCTATGCTTGACATTAATTGTGATGAATTAGTGAAACGCAGTGATGAGGTGATATTGTTCAAGATAGAGAATGCAGAAGTAAATGGAGAGGTTAATGGCACTCAAAACGTTCAAGATCATGATCTAAAAGGTGCCGCAACCTTATTTACGCTCACAAATTGTAATGTGCTTTTGTTGAAGGATGAATTTTTGACATTGATGATGTAG 1032 0.437 MSASPSSLSSPAKISSSCRRRWSAKGFCDGGFCLLITGEKRGGGCPWLEGVSRRSCIFFLCSVFCLFRNQIWWPPIATASTMSLFQNSDTNGNHNDNQACAACKFRRRKCAPNCIFAPYFPHYRQSQFLNAHKLFGVRNITRMIQKLDPHHKDDAMRSFIFQSDMRANDPVGGCYRYMQELVAQIEYHGAELDLVLQQLAVFGPHQPPNNNINVNADDDHHLNHEHRDNIDAPNLQDDVNSWDGQESLSLSFDDDDESNADYVGDELYDNQKPMASMLDINCDELVKRSDEVILFKIENAEVNGEVNGTQNVQDHDLKGAATLFTLTNCNVLLLKDEFLTLMM 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1796 343 ProSiteProfiles LOB domain profile. 98 199 IPR004883 -
Alju05g1796 343 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 97 217 - -
Alju05g1796 343 Pfam Lateral organ boundaries (LOB) domain 99 194 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1796 Alju-ChrAlju05 49379497 49382442 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1796 98 202 AS2 family AT3G13850 65.714 2.57e-44 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Alju05g1796 LOB 6.2e-33 No_clan