LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju05g1794	ATGGCGCTGGGGGTGTTGTTTTTCCTGATAATTAAGATGCATTTAGTTACCAGTGCCACACATTTTCATGGATATGAAGCCCCAAATCAACGCCATTCCAGAAGCCACGCAAGTATTGCTCTTCCACCAACCAAGACATCTTATGGAGTTCCTGCAAGTATTGCACTTCCACCTTCGAAGTCATTATCTAAGGCTCCTATAAAGGAATGGGCCCATGGTTTTGTAGATTCTCCAATATTACATCATAGGCATCAACATTCCAGAAGAAAGTCCCGTGAACCAGCGCCAGAGCCAACTTACTCAGTTCATCCACCAGCCTACAGTCATCAAGGTATAGGTCCTTCTGTCTTCCAACCACAACCTCCTTTCTCTTTACCAGCAGGCTGGAAATTACCTGCACCGGCACCATCACCAGCAGTTCTATCAGACCACTTCAATGTGCCCTCTCCTTCGCCTAGAATTACACCTCAGGGTTTACCATTGAGGAAGATGAAGTCTCCACCAACAGCACCTGTTTTGGGTCTGCCACCTCCACCTCCTAATAAGGACTGTATATGGGTGACTTGCTCAGAGCCCTTTACTTATGCACCTCCTGGATCACCTTGTGGTTGTGTATGGCCACTCCAAGTTAAGCTTCTCCTTGGTATTTCAATATACAAGTTCTTTCCCTTGGTGTCAAAGCTAGCTGAGGAAATTGCTGCTAGTGTTTTACTGAATCATAACCAGGTTCGCATTGTGGGAGCCGATGAAGCTGGTCAGCAACTGGAGAAAGCTATTGTTCTCATAAACTTGGTACCCACAGGACCAAGATTTGATGATGCTACAGCATTTTCAATATATAAGAAATTCTGGAACCGCAAGATCCACACAGATGCTTCCCTTTTTGGGGCCTGTAAAGTACTTCATGTTCATTACCCAGGTCTTCCTCCTTCTCCACCTTCAATTCCCTCAAACGTTGATAGCCCATTATTCCCTGGTAATGACAACAATGGAACAATGATGAAACCTTTGGGAGTGGCTATACCAAGGAAAGAAAAGACAGGAAGTGGAAAAATCATGACATTAGTAATTGGGCTGTCATCTTTTACAGCTCTTATTATATTTGTTGGATTTGCATGGCTTTGTCTGAGGAAATGTAAATCTTGTGTTCATGAGAGAAAACAAATTCCAAACACAATTCCATCCTCTTCAAAACTATCAGGGAGTGCCAGATCATTGCCTAATAGGAGCATGCCGGGATTCGGTTCTACGCCCTTAAGTTCTAGAACAATAACATATACAGGATCTGCTAAGACTTTTACTCTGAATGACATGGGGAAAGCAACTAACAATTTTGATGCTTCAAGAATATTAGGAGAAGGGGGCTTTGGGCCTGTGTATAAAGGGGTTCTATATGATGGAAGGGACGTGGCTGTGAAGATTCTCAAGAGAGATGATCGGCATGGTGGCCGTGAATTCCTAGCAGAAGTTGAGATGCTTAGCCGCCTGCACCATAGAAATTTAGTTAAATTGATAGGAATATGCATAGAGAATCAGACTCGGTGCCTGGTCTATGAGCTTGTCCCTAATGGAAGTGTGGAATCTCACTTACATGGTGCTGACAAGGAAGCTAATCCACTCGATTGGAATGCCCGGATGAAGATTGCACTTGGTGCAGCTCGCGCCTTGGCTTATTTGCATGAAGATTCAAATCCGTGTGTCATACATCGGGACTTTAAATCCAGCAACATCTTGTTGGAACATGATTTTACACCCAAGGTTTCAGATTTTGGATTAGCAAGAACTGCCCTGGAAGAGGGAAACAAGCACATCTCCACACATGTTATGGGAACATTTGGCTACCTAGCACCTGAATATGCCATGACAGGCCATCTTCTGGTCAAAAGTGACGTTTACAGTTATGGAGTTGTACTCCTTGAGCTCCTAACTGGAAGAAAGCCTGTAGATTTCTCACAACCACCAGGTCAAGAAAACCTTGTTACTTGGGTTCGTCCGCTTCTCACGAGTAAGGAGGGTTTAGAGATGATCATTGACCCAGTTATAAAGCCTAAAATCACCATTGACTCTGTTGTAAAAGTTGCGGCAATTGCATCAATGTGTATTCAACTTGAAGTGTCTCAACGCCCATTCATGGGTGAAGTTGTTCAGGCTTTGAAGCTGGTATGCAGTGAAATTGAGGAAACAGGCACAAGAAAACTAAGTAGTTTTCAAGAAGAAGGCCTTCAAGCCAAAGTAGATGAACAATCTTCAAGAGTTTCATGTGAGATGGTGGATTTTTCGGATCAGAAAACCAAAGAAGCAGTATCAACCTCGGAGTTTTTCAGCACATCAGGACAGTATATCGAGTCATTCAGGCGGCAATCGGCTTCAGGGCCTCTAACTACAGGAAAGAAAAAGCAGTTGTGGCAGAAACTGAAGAGTTTGTCTAGAGGGAGCATGAGTGAGCATGGGTCTTCAGCTCAACAATGGTCTGGTTCTCAGTAA	2484	0.438	MALGVLFFLIIKMHLVTSATHFHGYEAPNQRHSRSHASIALPPTKTSYGVPASIALPPSKSLSKAPIKEWAHGFVDSPILHHRHQHSRRKSREPAPEPTYSVHPPAYSHQGIGPSVFQPQPPFSLPAGWKLPAPAPSPAVLSDHFNVPSPSPRITPQGLPLRKMKSPPTAPVLGLPPPPPNKDCIWVTCSEPFTYAPPGSPCGCVWPLQVKLLLGISIYKFFPLVSKLAEEIAASVLLNHNQVRIVGADEAGQQLEKAIVLINLVPTGPRFDDATAFSIYKKFWNRKIHTDASLFGACKVLHVHYPGLPPSPPSIPSNVDSPLFPGNDNNGTMMKPLGVAIPRKEKTGSGKIMTLVIGLSSFTALIIFVGFAWLCLRKCKSCVHERKQIPNTIPSSSKLSGSARSLPNRSMPGFGSTPLSSRTITYTGSAKTFTLNDMGKATNNFDASRILGEGGFGPVYKGVLYDGRDVAVKILKRDDRHGGREFLAEVEMLSRLHHRNLVKLIGICIENQTRCLVYELVPNGSVESHLHGADKEANPLDWNARMKIALGAARALAYLHEDSNPCVIHRDFKSSNILLEHDFTPKVSDFGLARTALEEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDFSQPPGQENLVTWVRPLLTSKEGLEMIIDPVIKPKITIDSVVKVAAIASMCIQLEVSQRPFMGEVVQALKLVCSEIEETGTRKLSSFQEEGLQAKVDEQSSRVSCEMVDFSDQKTKEAVSTSEFFSTSGQYIESFRRQSASGPLTTGKKKQLWQKLKSLSRGSMSEHGSSAQQWSGSQ	827

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju05g1794	827	CDD	STKc_IRAK	451	719	-	-
	Alju05g1794	827	ProSiteProfiles	Protein kinase domain profile.	445	721	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Alju05g1794	827	Gene3D	Phosphorylase Kinase; domain 1	417	520	-	-
	Alju05g1794	827	MobiDBLite	consensus disorder prediction	78	100	-	-
	Alju05g1794	827	MobiDBLite	consensus disorder prediction	391	414	-	-
	Alju05g1794	827	PANTHER	OS01G0750732 PROTEIN	176	742	-	-
	Alju05g1794	827	MobiDBLite	consensus disorder prediction	808	827	-	-
	Alju05g1794	827	FunFam	Receptor-like serine/threonine-protein kinase ALE2	521	737	-	-
	Alju05g1794	827	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	567	579	IPR008271	GO:0004672\|GO:0006468
	Alju05g1794	827	Pfam	Protein tyrosine and serine/threonine kinase	448	718	IPR001245	GO:0004672\|GO:0006468
	Alju05g1794	827	Gene3D	Transferase(Phosphotransferase) domain 1	521	741	-	-
	Alju05g1794	827	MobiDBLite	consensus disorder prediction	153	175	-	-
	Alju05g1794	827	CDD	SP5_N	70	168	-	-
	Alju05g1794	827	FunFam	receptor-like serine/threonine-protein kinase ALE2	418	520	-	-
	Alju05g1794	827	SUPERFAMILY	Protein kinase-like (PK-like)	424	718	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju05g1794	Alju-ChrAlju05	49354865	49359678	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju05g1794	181	818	Receptor kinase-like Gene Family	AT5G56890	58.537	0.0	740

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_Extensin	Alju05g1794		PK_Tyr_Ser-Thr	2.4e-47	CL0016