Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1750 ATGGGAATGTCAAAGAGCTTCTTTTCTTCTCTCCTAGGTTGCCTGGTTTTTGCAGTTCTGGTTCAATCTCAGGATCAATCTGGATTCATAAGCATAGATTGTGGGATAGCAGCAGGTTATACCTACACAGAGAAAACAACAGGCATAAATTACATATCAGATGAGAATTTCATAAACTCTGGAGTGAGAAACTCCATAACCACTGATCTCCGAAATAAGTATCAAGAGCAACTTTGGAACCTGAGAAGCTTTCCTCAAGGAACAAGAAACTGTTACAGAATAAACACCACAAGTGGCTTTAAATATCTCATCAGGGCTAATTTTCTGTATGGGAATTATGATGGCCAGAATAAGTTGCCAAGTTTTGATCTTTATCTTGGGCCTAACTTGTGGCAAACAGTGAGTATAACTGATGCATCTGTGTTACTAAGCCCTGAGATCATACATGTTCCTTCACTAGATTACATTCAAATCTGTCTGGTTAACACAAGCTCTGGAACCCCATTTATTTCTGCTATAGAATTGAGGACTTTGATGAATGATACTTATGTTACTCAGTCTGGATCCTTGTCACTTTACTGGAGGTTGGATTTAGGCTCAACCAGCAACAGAACATACAGATATAATTATGATGTTTATGATCGCTTCTGGTGGTATAATGTCCCCAACCCGGCCTGGACGCAAATAAGTGCTTCAATTTCTGCAGATTCCTTTGTTCAAAATTATTACAAACCACCAGCCATTGTTATGAGTAATGCAGCCACACCAGTAAATGAAAGTGCTCCAATGATAGTTTGGTGGCGGCCCAAAAATGCATCAGACCAATTCTATGTTTACATGCATTTTGCTGAGCTTCTAGTATTACAAAAGAATCAGACAAGATCATTCACCATTACCGTCAACGGCAATCTCTTTTATGCTGATCTTGTACCTCAGTACCAAGCCACAACCACTATATTCAGCAAGTATGGTGCCAGTGGAGAAATAATGAAGTTTTTGCTTCAGAAGACTGAGCGTTCAACCCTGCCTCCCATTCTCAACGCCATCGAAGTTTATACGGTTAAAGAGTTTTCGCAATCAGAAACAGAACAAGAAGATGTTGATGCAATCACAACAATCAAGTCTACTTATGGGGTGACAAGAAATTGGCAAGGAGATCCATGTGGCCCTGTGGCCTACATTTGGGAAGGTCTAAATTGTGCTTATAATGGCCAGAATTCCCCAAGAATCACAGCCCTGAATTTATCTTCAAGTGGATTGACAGGACGGATTGATCCTTCCATATCAAATCTTACCAAGTTGGAGAAGTTGGATTTATCAAACAATAGCTTAAATGGATCAGTTCCTGATTTTCTGTCTCAACTACAAAACCTGAAGATCTTAAACCTTCAGAACAACAACTTCTCAGGTACAGTTCCCTCTGATCTGGTTGAAAAATCAAACCAAGGTTCCCTATTACTAAGTGTTGGAAATAATCCATATCTATGTGAATCTCCTCCATGCAACAAGAAGAAAAAGAACAGTATTATTATTCCCACAATAGCATCAGTTGGTGGAGTTCTGATCCTTGTGGTAGCTGCGGCAACTTTATTTTTTACTCTTAAAAGGCGAAAACCAAGAGGCGAGGCTGGTCTACCAAGAGGAATAAATTCAATTGAAACGTCGCAGCAAATTGAAAGAGTTGAACAACAAAGTGATATGACTCTGATAGAAGCAAATAGACAATATTCATACAATAATGTCAAAGGAATGACCAATGACTTCAGCAGAATTCTTGGTAGAGGTGGGTTCGGATCAGTTTATTTGGGCTACATTGATCAAACTCCTGTTGCAATTAAAATGCTCTCTCTATCTTCAGTTCAAGGTTATCAGGAATTCCTAGCAGAGGTTAAGCTTTTAATGAGAGTTCATCACAAAAATCTGACTTCCCTTATTGGGTATTGTAATGAAGAAACCAATAAAGGGCTCATATATGAACACATGGCTAATGGTAACCTACAAGACTACCTTTCAGGAAATAACAACAAATCGAAGGTCCCGACTTGGCAAGACAGACTTTGTATAGCACTGGATGCAGCACTAGGGTTGGAGTATCTGCATAATGGATGTAGGCCACCTATAATTCACAGAGATGTAAAATCTTCAAACATCTTGTTGAATGAAAACTTCAGAGCAAAAATAGCAGACTTTGGTCTATCTAAAATCATCCCAACCGATGATGGAAGTCATGTGTCAACTGTTGTTGCTGGTACTCCTGGTTACCTAGACCCTGAGTACTATAAAACAAACAGATTGACGGAGAAAAGTGATGTTTATAGTTTTGGAGTAGTTCTTTACGAGATAATCACCGGTCTGCCAGTCATATCAAAAGGCGATGAGAGAACTCACATAAGTCAATGGGTTAAGTCCATGGTTGATAAAGGAGATATAAGGGCCATTGTTGACACAAAGTTGAGTGGAGACTTTGGCATTAACTCTGTTTGGAGATATGTGGAAATGGCGATGAAATGTGTGACATCAAACCCCAATGAAAGGCCAGCCATGAGTGGGGTAGTGAATGAGCTAAAGGAGTGTTTGGAAATTGAACTAAGTAGAACCAGACACAATGGTGCTAGTACCAGTGGTTTTTCTCAATTAGTAGTGTCTGTGAATATGGAAAGTACAGAATTCTCCCCTTCAGTCAGGTAG 2688 0.3951 MGMSKSFFSSLLGCLVFAVLVQSQDQSGFISIDCGIAAGYTYTEKTTGINYISDENFINSGVRNSITTDLRNKYQEQLWNLRSFPQGTRNCYRINTTSGFKYLIRANFLYGNYDGQNKLPSFDLYLGPNLWQTVSITDASVLLSPEIIHVPSLDYIQICLVNTSSGTPFISAIELRTLMNDTYVTQSGSLSLYWRLDLGSTSNRTYRYNYDVYDRFWWYNVPNPAWTQISASISADSFVQNYYKPPAIVMSNAATPVNESAPMIVWWRPKNASDQFYVYMHFAELLVLQKNQTRSFTITVNGNLFYADLVPQYQATTTIFSKYGASGEIMKFLLQKTERSTLPPILNAIEVYTVKEFSQSETEQEDVDAITTIKSTYGVTRNWQGDPCGPVAYIWEGLNCAYNGQNSPRITALNLSSSGLTGRIDPSISNLTKLEKLDLSNNSLNGSVPDFLSQLQNLKILNLQNNNFSGTVPSDLVEKSNQGSLLLSVGNNPYLCESPPCNKKKKNSIIIPTIASVGGVLILVVAAATLFFTLKRRKPRGEAGLPRGINSIETSQQIERVEQQSDMTLIEANRQYSYNNVKGMTNDFSRILGRGGFGSVYLGYIDQTPVAIKMLSLSSVQGYQEFLAEVKLLMRVHHKNLTSLIGYCNEETNKGLIYEHMANGNLQDYLSGNNNKSKVPTWQDRLCIALDAALGLEYLHNGCRPPIIHRDVKSSNILLNENFRAKIADFGLSKIIPTDDGSHVSTVVAGTPGYLDPEYYKTNRLTEKSDVYSFGVVLYEIITGLPVISKGDERTHISQWVKSMVDKGDIRAIVDTKLSGDFGINSVWRYVEMAMKCVTSNPNERPAMSGVVNELKECLEIELSRTRHNGASTSGFSQLVVSVNMESTEFSPSVR 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1750 895 FunFam Leucine-rich repeat receptor-like kinase 365 497 - -
Alju05g1750 895 SUPERFAMILY L domain-like 370 479 - -
Alju05g1750 895 ProSitePatterns Protein kinases ATP-binding region signature. 592 613 IPR017441 GO:0005524
Alju05g1750 895 CDD STKc_IRAK 592 857 - -
Alju05g1750 895 ProSitePatterns Serine/Threonine protein kinases active-site signature. 707 719 IPR008271 GO:0004672|GO:0006468
Alju05g1750 895 ProSiteProfiles Protein kinase domain profile. 586 859 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju05g1750 895 Gene3D Transferase(Phosphotransferase) domain 1 661 875 - -
Alju05g1750 895 Gene3D Phosphorylase Kinase; domain 1 572 660 - -
Alju05g1750 895 PANTHER OS07G0107800 PROTEIN-RELATED 30 859 - -
Alju05g1750 895 Pfam Malectin-like domain 32 354 IPR024788 -
Alju05g1750 895 Gene3D Ribonuclease Inhibitor 367 485 IPR032675 -
Alju05g1750 895 SMART serkin_6 586 859 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju05g1750 895 Pfam Leucine rich repeat 408 468 IPR001611 GO:0005515
Alju05g1750 895 ProSiteProfiles Leucine-rich repeat profile. 433 455 IPR001611 GO:0005515
Alju05g1750 895 SUPERFAMILY Protein kinase-like (PK-like) 564 855 IPR011009 -
Alju05g1750 895 CDD TM_EGFR-like 511 538 - -
Alju05g1750 895 Pfam Protein tyrosine and serine/threonine kinase 588 855 IPR001245 GO:0004672|GO:0006468
Alju05g1750 895 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 661 868 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1750 Alju-ChrAlju05 48899404 48904739 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1750 1 895 Receptor kinase-like Gene Family AT1G51800 48.953 0.0 847
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Alju05g1750 Malectin_like 1e-112 CL0202