Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1749 ATGGATGTCGCTGGCGTCCTAAAGGTATTACTCCTCAGCGTCGCCGCCGGCACCTTATATACGTTGGGATTCATATTAATTGGCTTTTTGCTTTGGCACCTTTCCCTTTGCTTTTTTCACTGCTGCCTCTTCCTCTGCGACCTCCACCTCCGCCTCCGCCGCTACTTTTTTGCCGATCACATTCCCCAACCTCCCATTGTAGTTCATGATCACATTCTCCCTCTCCCTCATCCTCCTCCTCCTACCCATTCTCTCCTTCCCACCTTCACCTACTCCGCCCCCAGAACAGAGGAGCGCGGTCACCCTCCGCCACCGCCGCCGGAGTGTGCCATCTGCTTGATGGAGTTCAAAGAGGGAGACATAGGCCGGATACTCCCGAACTGTGACCACATCTTTCACATCGTTTGCATCGATAAGTGGCTCCCAACAAACAAGACTTGCCCATTGTGCCGAGAGGTCGTCAATCCGCCCTCACGGCATGAAAGGGGAGAAGAAGGTCGGTTAGAGAATAATACTAATTCGTCCATTGTTATTAATCTTCTTCCTCCAGCAATTTGA 558 0.5197 MDVAGVLKVLLLSVAAGTLYTLGFILIGFLLWHLSLCFFHCCLFLCDLHLRLRRYFFADHIPQPPIVVHDHILPLPHPPPPTHSLLPTFTYSAPRTEERGHPPPPPPECAICLMEFKEGDIGRILPNCDHIFHIVCIDKWLPTNKTCPLCREVVNPPSRHERGEEGRLENNTNSSIVINLLPPAI 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1749 185 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 83 158 IPR013083 -
Alju05g1749 185 SUPERFAMILY RING/U-box 108 157 - -
Alju05g1749 185 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 86 169 - -
Alju05g1749 185 SMART ring_2 109 150 IPR001841 -
Alju05g1749 185 Pfam Ring finger domain 108 151 IPR001841 -
Alju05g1749 185 ProSiteProfiles Zinc finger RING-type profile. 109 151 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1749 Alju-ChrAlju05 48872298 48872855 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1749 8 161 C3H Transcription Factor Family AT2G42360 38.961 1.48e-18 78.6