Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1745 ATGGCCGCGGAATTCAGATGCAACTGGGCTTGGCTCTCTTTGTTATGGTTTGTCTCTGTATCAGTATTTTCTATTCAGGAAGGTGATGGGAAACCCATAGTTCTGGCTACAGAGAAAAACTCTGCACATCACAAACAGGCCAGAAGGAAATTAGATGATGTTGGTGGCTCTATTGACATTGACTGTGGCCTACGTGATGAGCTTGGCTATGCAGATGGCAAAACTGAGATACCCTACACTACGGATTTAAAATTCATCGATACCGGAGAAAACCAGGACATATCAATTGAGTTCATTTCTGAAAGTCTTGAAAGAACATTTAGAAATGTAAGAAGCTTTCCTGAGGGTAAGAGGAATTGTTACACTCTAAGACATCCAGAAGGTAAACATACTGTTTACTTGTTGAGAGCTTCTTTCTTGTATGGCAACTATGATGGTCTGAATCAACCTCCCAAGTTTGATCTTTATATTGGAGTTAACAAGTGGGACACTATAAGCTTCAACAATGCATCCCAAATTGTAATAGAGGAGATTTTACACATGCCGCCGATGGATGTTGTACATGTTTGCTTACTGAACACTGATGGAGGAACTCCTTTTATATCAGCATTGCAGATGAGGCATCTTCATAATTCAATTTATATTAACAAATCTCAAACCTTAGCTCTATATAAACGCCTTGACTTTGGTTCAACAACCAATGAAATAGTGAGGTTTGAAGAAGATGCCTATGATAGAATTTGGCATCCTTACAATTTACCTCATTGTAAGTCACTGAGTACTAGTTTGAACATTGACTCCTTGAACAACGCATATCGGTTACCATCAACAGTAATGAGAACTGCTGTAACACCAACTAATGGTAGTGACCCCCTGGAAGTTCAGTTTGACACTGGTGATCCTATTTCAAAATTCTATGTTTATATGCATTTTGCTGAGATTGAGGAGCTCCAGGAAAATGAACACAGAGAATTCAACATCACATTGAATGGAAAATTGTTGAATGAGTCTGTAAACTATGTAGTCCTTCAATATTTAGACCTTACCACAATTCATAATCCACAGCCCATCACAGGACCCAAGCTTTGGTTCTCTATGAATAAGAAAGAAAATTCCACTCTTCCTCCCATTCTTAATGCAATGGAGATTTACTTTGAGAAAGATTCATATCAGGAACCTACAGACCAAGAAGATGTTAATGCTATCATGGACATCAAACAAGCCTACACTATTAAGTCTTGGCAAGGAGATCCTTGTGCACCAATGTTCTATCCCTGGGATGGACTTAACTGCAGTTTCGATGGATATCATGCGCCTAGAATAATTAAATTAGATCTATCCTCCAGCAACTTGTCAGGGACAATAAGTGAATCATTTTCCATGCTTAAATCTTTAGAATATTTGGATTTATCAAACAATAGTTTTACCGGATCGCTTCCTGATTTTTTCATGCATTTGCAACACTTGAAGACTCTAAATTTATCAGGAAACAGGCTCTCTGGTGAAATTCCATTACCTCTCAAGGAAAGATCAAATAATGGGTCACTTTTTTTGAGTGTGGATGGAAATCCTGACCTTTGTCTGCAAGCTCCATGCAAAGAGGACAATGGTACTTTTCCACTGCATGCAGTCATAGCCACTATTTCATCCCTAGTCTTTTTGATTGTACTGTGTATTGTAGTCTGCATCATTTGGAGAAGGAAATTCAGCAAAAAACCAGAGAATCAGCCAGTGACATCACATGAGGAAGTTGTGCTGAAGTCAAGCAATACACAATTCACATACTCCCAGATAGTAGATATTACAAATAACTTTGAGAAAATGATTGGTAAAGGAGGATCTGGAACTGTTTATCATGGCTTCTTATCTGATGACACACAAGTTGCTGTCAAACTGCTCTCATCACCAGAAAGCTGTAGGCAGTTTCAGACAGAGGCAGAACTCTTGATGCGAGTTCATCATAGAAACTTAGCTTCCTTCCTTGGATATTGTAATGAAGATGGACACTCAGCAATCATATATGAATTCATGGCTTATGGGAACTTAGAGAAGTGTCTTTCAGGTTCGATGAAAGAATTATCAAGTTGGAAAAATAGGATTCAAATAGCAGTCGATGCTGCTCAAGGACTTGAGTATTTGCATCATGGCTGCAAGCCTCCTATAGTTCACAGGGACATAAAGACATCAAACATTTTGCTGAATGAGAAAATGCAGGCAAAAGTTGCTGATTTTGGGTTCTCAAAGTCCTTTTCAACAGAAAGTGAAAGCCATATATCAACTGGAGTCATTGGAACATTCGGATACCTTGATCCGGAATACTACTCATCCTACAGGCTTACCGAGAAAAGTGATGTTTATAGTTTTGGTGTTGTGCTTTTGGAGCTTATTACAGGGAAGAGAGCAATAATAAAAGGTCAAGAAAACACTCACATTGTGAATTGGACTACCCCTTTTGTTGAAAGAGGAGATCTGCAAAAAATTGTGGATCCAAGGTTGCAAGGAGACTTTGATTTTGGTTCTATGTGGAAGGCTGTGGAAGCAGCAATAGCTTGTGTATCTCCAACTTCTATCCAAAGACCAACAATGAGTTATATTGTCCCAGAATTAAAAGAAAGCTTAGAAATGGAAGTAGTTCGCAAACAAAAGTCCCGGGGTTCAGATGGAAAAATGCTGAAATCAAACAGTTCATTTGACACCCATGTTGTTGATCTTGAAGCTGCCTCTGGTCCAGAAGCAAGATAG 2742 0.3888 MAAEFRCNWAWLSLLWFVSVSVFSIQEGDGKPIVLATEKNSAHHKQARRKLDDVGGSIDIDCGLRDELGYADGKTEIPYTTDLKFIDTGENQDISIEFISESLERTFRNVRSFPEGKRNCYTLRHPEGKHTVYLLRASFLYGNYDGLNQPPKFDLYIGVNKWDTISFNNASQIVIEEILHMPPMDVVHVCLLNTDGGTPFISALQMRHLHNSIYINKSQTLALYKRLDFGSTTNEIVRFEEDAYDRIWHPYNLPHCKSLSTSLNIDSLNNAYRLPSTVMRTAVTPTNGSDPLEVQFDTGDPISKFYVYMHFAEIEELQENEHREFNITLNGKLLNESVNYVVLQYLDLTTIHNPQPITGPKLWFSMNKKENSTLPPILNAMEIYFEKDSYQEPTDQEDVNAIMDIKQAYTIKSWQGDPCAPMFYPWDGLNCSFDGYHAPRIIKLDLSSSNLSGTISESFSMLKSLEYLDLSNNSFTGSLPDFFMHLQHLKTLNLSGNRLSGEIPLPLKERSNNGSLFLSVDGNPDLCLQAPCKEDNGTFPLHAVIATISSLVFLIVLCIVVCIIWRRKFSKKPENQPVTSHEEVVLKSSNTQFTYSQIVDITNNFEKMIGKGGSGTVYHGFLSDDTQVAVKLLSSPESCRQFQTEAELLMRVHHRNLASFLGYCNEDGHSAIIYEFMAYGNLEKCLSGSMKELSSWKNRIQIAVDAAQGLEYLHHGCKPPIVHRDIKTSNILLNEKMQAKVADFGFSKSFSTESESHISTGVIGTFGYLDPEYYSSYRLTEKSDVYSFGVVLLELITGKRAIIKGQENTHIVNWTTPFVERGDLQKIVDPRLQGDFDFGSMWKAVEAAIACVSPTSIQRPTMSYIVPELKESLEMEVVRKQKSRGSDGKMLKSNSSFDTHVVDLEAASGPEAR 913
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1745 913 CDD STKc_IRAK 609 871 - -
Alju05g1745 913 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 677 882 - -
Alju05g1745 913 SMART serkin_6 603 897 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju05g1745 913 Gene3D Transferase(Phosphotransferase) domain 1 677 895 - -
Alju05g1745 913 ProSiteProfiles Protein kinase domain profile. 603 897 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju05g1745 913 ProSitePatterns Protein kinases ATP-binding region signature. 609 631 IPR017441 GO:0005524
Alju05g1745 913 ProSitePatterns Serine/Threonine protein kinases active-site signature. 721 733 IPR008271 GO:0004672|GO:0006468
Alju05g1745 913 FunFam Leucine-rich repeat receptor-like kinase 397 529 - -
Alju05g1745 913 Pfam Malectin-like domain 60 384 IPR024788 -
Alju05g1745 913 Gene3D Ribonuclease Inhibitor 395 554 IPR032675 -
Alju05g1745 913 SUPERFAMILY Protein kinase-like (PK-like) 581 867 IPR011009 -
Alju05g1745 913 Gene3D Phosphorylase Kinase; domain 1 575 676 - -
Alju05g1745 913 Pfam Protein tyrosine and serine/threonine kinase 605 813 IPR001245 GO:0004672|GO:0006468
Alju05g1745 913 PANTHER OS07G0107800 PROTEIN-RELATED 58 873 - -
Alju05g1745 913 Pfam Leucine rich repeat 443 499 IPR001611 GO:0005515
Alju05g1745 913 SUPERFAMILY L domain-like 422 517 - -
Alju05g1745 913 PRINTS Leucine-rich repeat signature 465 478 - -
Alju05g1745 913 PRINTS Leucine-rich repeat signature 486 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1745 Alju-ChrAlju05 48824010 48830923 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1745 50 913 Receptor kinase-like Gene Family AT2G19210 46.241 0.0 783
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Alju05g1745 Malectin_like 3.1e-108 CL0202