Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1733 ATGACTGATAAGAAAGCTTTCTCATCATCCTCTTCTGCTAATCCAGCTGTTCCCTCTAATATCTCTCAGAAAAGAACTGCTCCTGGCCCAGTAGTGGGTTGGCCTCCAATTCGTTCGTTTAGGAAGAAGCTTGCAAGCAACAGCATTTCTAAGACAGCTCATGAGACACAACAGCAGCAGAATGATGTTGCAGAAAAGGTTGCTGGGAAAAAACCTGTTGCTGACAACGCTGGTAAAGGTTTGTTTGTGAAGATCAATATGGATGGAGTTCCCATAGGAAGAAAAGTTGACCTTAATGCTTACGACAGCTATGAAAAACTCTCCTCTGCAGTTGATGAACTCTTCAGATGTCTCCTTGCTGCTCAAAGAGATTCCTCTGCTGGAGGAATCAAGAACAAGGAAGAAGATGAAGAAAAAGCTATTACAGGTTTATTGGATGGAAGTGGGGAATATACTCTTGTTTATGAGGATAATGAAGGAGACAGGATGCTCGTTGGGGACGTGCCATGGCACATGTTTGTATCAACTGTGAAGAGGCTGCGTGTGCTGAAGAGTTCTGAGCTTTCTGCTTTTACCCTTGGTAACAAGCAACACAAGAAATCCAGTTGA 609 0.4335 MTDKKAFSSSSSANPAVPSNISQKRTAPGPVVGWPPIRSFRKKLASNSISKTAHETQQQQNDVAEKVAGKKPVADNAGKGLFVKINMDGVPIGRKVDLNAYDSYEKLSSAVDELFRCLLAAQRDSSAGGIKNKEEDEEKAITGLLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSELSAFTLGNKQHKKSS 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1733 202 ProSiteProfiles PB1 domain profile. 80 185 IPR000270 GO:0005515
Alju05g1733 202 MobiDBLite consensus disorder prediction 1 26 - -
Alju05g1733 202 Gene3D - 75 197 - -
Alju05g1733 202 MobiDBLite consensus disorder prediction 43 64 - -
Alju05g1733 202 MobiDBLite consensus disorder prediction 1 70 - -
Alju05g1733 202 SUPERFAMILY CAD & PB1 domains 73 182 - -
Alju05g1733 202 FunFam Auxin-responsive protein 75 197 - -
Alju05g1733 202 Pfam AUX/IAA family 12 190 IPR033389 -
Alju05g1733 202 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 16 188 IPR003311 GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1733 Alju-ChrAlju05 48675371 48677788 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1733 49 196 B3 DNA Binding Superfamily AT4G23980 31.081 2.54e-16 74.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Alju05g1733 AUX_IAA 1.4e-67 CL0072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju05g1733 05 48675371 48677788 Alju05g1733 05 48675371 48677788 ECH