Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1718 ATGCCGGTACTGCGTAGTGGAGTGCGCAGGGGCCGGGCAGCAGCAAAGAAACAGCAGCAGCAGCAACCTAGTCCATTGATCGAGGAGGGTGAAGCAATTGCAACAAGAACAAGGGGGAGGCGGGCAGCAGCGGCGGCGGCAGCTGAGCCTAAGGCTAACAAACAACAGAAGCAGGAGGTTGTCGATGAGAAGGTAGCTGTACCGGTGAAGGAGGACGAGATCAAGGGTTTGAACGAAGCTGTTCGTGTTGGTGAAGCTGCTGCTGGTGGAGCGGAGAGAGAAGAGGTTGGAGAGAAGCAGATGGATGACTACGATAGTGGTGGAGGCCGGAGCAACGATAAGGGCAATGCCGGTGAAGATGAGGGGAGTACCGCTCCGCTTCCTGAGAAGGTTCAAGTTGGCGGTTCTCCTATGTATAAAATTGATAGAAAACTTGGTAAGGGTGGATTTGGACAAGTATATGTTGGCCGACGAATTTCTGGTGTAAATATGAATGAAAGGACTGGACCTGGAGCTGTAGAGGTTGCCCTAAAATTTGAGCATAGAAGTAGTAAAGGATGTAATTATGGACCGCCATATGAGTGGCAAGTGTACAGTAATCTTGGTGGAAGTCACGGTGTGCCAAGAGTGCACTACAAGGGAAGGCAAGGTGACTATTATATCATGGTTATGGATATGCTGGGACCCAGTTTGTGGGATGTTTGGAATAATAACTCTCATACAATGTCCACTGAAATGGTTGCTTGTATTGCCATTGAAGCAATATCCATATTGGAAAAGATGCACTCTCGAGGGTATGTGCATGGAGATGTGAAGCCTGAAAATTTTCTGCTTGGTCCTCCTGGGACTCCTGATGAAAAAAAGCTGTTTCTTGTTGATCTTGGATTAGCTACGAGATGGAAGGATAGTACAACGGGTATGCATGTGGAATATGACCAACGCCCTGATGTTTTCAGGGGTACAGTTCGCTATGCTAGTGTGCATGCACACTTGGGAAGAACTGGCAGCAGGAGAGATGATCTGGAATCACTTGCTTACACATTGATTTTCCTTCTTCGAGGTCGTCTCCCTTGGCAGGGGTATCAGGGAGAAAACAAAGGGTTTCTTGTTTGCAAGAAGAAGATGGGAACTTCTCCAGAGAGCCTATGTTGCTTCTGCCCCCTGCCTTTTAGACATTTTGTTGAACACGTGGTTAACTTGAAGTTCGATGAAGATCCTAACTATGCAAAATATATTTCTCTGTTTGATGGCATTGTTGGTCCAAATCCAGATATTAGGCCAATTAATACGGAAGGTGCACAAAAGCTCATTGGTCATAAGAGAGGTCGGTTGGCCATGGAAGAAGAGGATGATGAACAACCTAAAAAGAAGATCCGCATGGGTATGCCAGCAACACAATGGATAAGCGTTTACAATGCTCGCAGACCAATGAAACAAAGATATCATTACAATGTGGCTGATGCAAGGCTGTCTCAGCACATCGAGAAAGGAAATGAGGATGGGTTATATATTAGCAGTGTGGCTTCATGTCAGAACCTGTGGGCCCTAATCATGGATGCAGGAACTGGTTTTACTGCCCAGGTTTATGAACTCTCTTCTTATTTTCTCCACAAGGAATGGATAATGGATCAATGGGAAAAAAATTACTATATAAGCGCAATAGCTGGAGCTACAAATGGGAGTTCGTTAGTAGTGATGTCTAAGGGCACACAGTTTGTACAGCAATCCTACAAAGTGAGTGATTCATTTCCATTTAAGTGGATAAACAAAAAATGGAGGGAGGGCTTTTATGTCACTGCAATGGCCACTGCTGGTAGCAGATGGGCAGTAGTAATGTCTCGTGGTGCAGGATTTTCTGATCAGGTGGTTGAACTAGATTTTCTTTACCCCAGTGAAGGGATTCACAAACGATGGGATTGTGCATATCGTATCACAGCAACCGCAGCAACTTGGGATCAAGCAGCATTTGTCCTTAGTGTGCCTAGGAGGAAACCTGCGGATGAAACACAGGAAACACTGAGAACTTCGTCTTTTCCCAGTGTACATGTCAAGGAGAAGTGGGCAAAGAATCTCTATATTGCATCTATTTGCTATGGAAGGACAGTTTCTTGA 2112 0.456 MPVLRSGVRRGRAAAKKQQQQQPSPLIEEGEAIATRTRGRRAAAAAAAEPKANKQQKQEVVDEKVAVPVKEDEIKGLNEAVRVGEAAAGGAEREEVGEKQMDDYDSGGGRSNDKGNAGEDEGSTAPLPEKVQVGGSPMYKIDRKLGKGGFGQVYVGRRISGVNMNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYSNLGGSHGVPRVHYKGRQGDYYIMVMDMLGPSLWDVWNNNSHTMSTEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATRWKDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKMGTSPESLCCFCPLPFRHFVEHVVNLKFDEDPNYAKYISLFDGIVGPNPDIRPINTEGAQKLIGHKRGRLAMEEEDDEQPKKKIRMGMPATQWISVYNARRPMKQRYHYNVADARLSQHIEKGNEDGLYISSVASCQNLWALIMDAGTGFTAQVYELSSYFLHKEWIMDQWEKNYYISAIAGATNGSSLVVMSKGTQFVQQSYKVSDSFPFKWINKKWREGFYVTAMATAGSRWAVVMSRGAGFSDQVVELDFLYPSEGIHKRWDCAYRITATAATWDQAAFVLSVPRRKPADETQETLRTSSFPSVHVKEKWAKNLYIASICYGRTVS 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1718 703 FunFam casein kinase 1-like protein HD16 112 459 - -
Alju05g1718 703 Gene3D Transferase(Phosphotransferase) domain 1 109 462 - -
Alju05g1718 703 ProSitePatterns Protein kinases ATP-binding region signature. 145 178 IPR017441 GO:0005524
Alju05g1718 703 Pfam Protein kinase domain 139 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju05g1718 703 SUPERFAMILY Protein kinase-like (PK-like) 139 419 IPR011009 -
Alju05g1718 703 ProSiteProfiles Protein kinase domain profile. 139 442 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju05g1718 703 SMART serkin_6 139 437 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju05g1718 703 MobiDBLite consensus disorder prediction 1 61 - -
Alju05g1718 703 CDD STKc_CK1 138 415 - -
Alju05g1718 703 PANTHER CASEIN KINASE-RELATED 133 666 - -
Alju05g1718 703 MobiDBLite consensus disorder prediction 88 117 - -
Alju05g1718 703 ProSitePatterns Serine/Threonine protein kinases active-site signature. 266 278 IPR008271 GO:0004672|GO:0006468
Alju05g1718 703 MobiDBLite consensus disorder prediction 85 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1718 Alju-ChrAlju05 48421851 48426405 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1718 234 415 MAP Kinase Kinase Kinase AT5G50180 26.842 1.46e-08 55.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Alju05g1718 Pkinase 5.2e-16 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju05g1718 05 48421851 48426405 Alju05g1718 05 48421851 48426405 ECH