Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1701 ATGACGAATCAAACCTCCCCTGAAACTACCACTGCCAGTAACTCTCCTTCTTCCTCGTCGGAAATATCAAACCCTACTTCCGATTCTCAGACACAGAAAACTGAATCTCAGAGCACTTGCAGAGCCAAGAGAAGCAGAGGCTCTTCCAACAAGCACCCATCCTACCACGGAGTCCGAATGCGAAATTGGGGCAAATGGGTCTCTGAAATTCGAGAGCCTCGCAAGAAATCACGAATCTGGCTCGGCACTTTCGCCACTCCAGAAATGGCGGCTCGAGCCCACGACGTCGCCGCCCTGAGCATCAAGGGTGAAACCGCTGTCCTCAACTTTCCCCACTTATCATCTCTGCTTCCTAGACCCGTCACACTCGACCCACGTGATATCCAAGCCGCCGCCGCCGGAGCAGCCGCCATGGTGAAATTCGACCCCGCTCAGCCTTCGTCTTCGCCACCACTGGAAGAAGCAGAGTCTTCGGAGCTGAGTGAGATAGTGGAATTGCCCAACATTGAAGAGAGCTTCGATTCAGTGGAGTCGTCGTCGTCCACGAGCCGCGACTTTGTATGGGTAGAGTCCATGGATTGTTGGGTGTATGATCCTCCATTAATGGGGTTACAGAAAGAAGGCTTCTTTGACCAGTTTTATGGAGAAGAAGAAGAAGGCGGCTTTAAGATTTCAATTTGGGATTGA 687 0.5182 MTNQTSPETTTASNSPSSSSEISNPTSDSQTQKTESQSTCRAKRSRGSSNKHPSYHGVRMRNWGKWVSEIREPRKKSRIWLGTFATPEMAARAHDVAALSIKGETAVLNFPHLSSLLPRPVTLDPRDIQAAAAGAAAMVKFDPAQPSSSPPLEEAESSELSEIVELPNIEESFDSVESSSSTSRDFVWVESMDCWVYDPPLMGLQKEGFFDQFYGEEEEGGFKISIWD 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1701 228 FunFam Ethylene-responsive transcription factor 2 53 112 - -
Alju05g1701 228 SUPERFAMILY DNA-binding domain 54 112 IPR016177 GO:0003677
Alju05g1701 228 CDD AP2 53 113 IPR001471 GO:0003700|GO:0006355
Alju05g1701 228 Gene3D AP2/ERF domain 54 112 IPR036955 GO:0003700|GO:0006355
Alju05g1701 228 Pfam AP2 domain 53 103 IPR001471 GO:0003700|GO:0006355
Alju05g1701 228 PRINTS Ethylene responsive element binding protein signature 77 93 IPR001471 GO:0003700|GO:0006355
Alju05g1701 228 PRINTS Ethylene responsive element binding protein signature 55 66 IPR001471 GO:0003700|GO:0006355
Alju05g1701 228 ProSiteProfiles AP2/ERF domain profile. 54 111 IPR001471 GO:0003700|GO:0006355
Alju05g1701 228 SMART rav1_2 54 117 IPR001471 GO:0003700|GO:0006355
Alju05g1701 228 MobiDBLite consensus disorder prediction 1 44 - -
Alju05g1701 228 MobiDBLite consensus disorder prediction 1 57 - -
Alju05g1701 228 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 30 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1701 Alju-ChrAlju05 48204587 48205273 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1701 22 200 AP2-EREBP Transcription Factor Family AT5G11590 52.284 1.19e-57 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Alju05g1701 AP2 1.9e-13 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju05g1701 05 48204587 48205273 Alju05g1701 05 48204587 48205273 ECH