Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1693 ATGGAACAGAAGTGGCCTTTTCTTCCATATTCTTCTTCACTCTCAACACTTCCCTATTATCTTCTCTCTCACACACAAAAATTTCCAAAGATGGCCGGCATAGCTTTCGGACGCTTCGATGATTCTTTCAGTCTAAGCTCCATTAAAGCCTACATAGCCGAGTTCATCTCAACCCTCCTTTTTGTTTTTGCCGGCGTTGGTTCTGCCATAGCCTATGGGAAGTTGACAAATGATGCAGCACTAGATCCAGCAGGGTTGGTAGCAGTGGCAATATGCCATGGATTTGCTTTGTTTGTGGCAGTCTCAATCGGAGCCAACATTTCTGGTGGCCATGTGAACCCGGCGGTGACCTTTGGGTTGGCTCTCGGAGGTCAGATCACAATCCTCACCGGAATCTTCTACTGGATTGCTCAACTTGTCGGCGCCATTGTCGCTTGCTTCCTCCTCAAGTTTGTCACCGGAGGCTTGGCAACTCCTACTCACAGTGTGGCTGCTGGAGTGGGAGCAGTGGAAGGAGTGGTTATGGAGATTGTTATCACTTTTGCTTTGGTGTACACTGTGTATGCCACAGCTGCTGACCCTAAGAAGGGTTCTCTTGGGACCATTGCTCCCATGGCCATTGGCTTTATTGTTGGTGCCAACATCCTGGCCGCCGGCCCCTTCTCCGGTGGCTCTATGAACCCGGCTCGGTCCTTTGGCCCCGCCGTGGCTTCCGGCGACTTCCATGACAACTGGATCTACTGGGTTGGACCCCTCGTTGGTGGTGGCTTGGCTGGTCTTATCTATGCCAATGTCTTCATGGGCTCTGAACATGCACCTTTGGCTAATGAGTTTTAA 837 0.509 MEQKWPFLPYSSSLSTLPYYLLSHTQKFPKMAGIAFGRFDDSFSLSSIKAYIAEFISTLLFVFAGVGSAIAYGKLTNDAALDPAGLVAVAICHGFALFVAVSIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLVGAIVACFLLKFVTGGLATPTHSVAAGVGAVEGVVMEIVITFALVYTVYATAADPKKGSLGTIAPMAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGDFHDNWIYWVGPLVGGGLAGLIYANVFMGSEHAPLANEF 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1693 278 ProSitePatterns MIP family signature. 111 119 IPR022357 -
Alju05g1693 278 FunFam Probable aquaporin TIP1-1 32 278 - -
Alju05g1693 278 PRINTS Major intrinsic protein family signature 245 265 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju05g1693 278 PRINTS Major intrinsic protein family signature 175 193 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju05g1693 278 PRINTS Major intrinsic protein family signature 49 68 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju05g1693 278 PRINTS Major intrinsic protein family signature 208 230 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju05g1693 278 PRINTS Major intrinsic protein family signature 93 117 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju05g1693 278 PRINTS Major intrinsic protein family signature 130 149 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju05g1693 278 Gene3D Glycerol uptake facilitator protein. 31 276 IPR023271 -
Alju05g1693 278 PANTHER AQUAPORIN-8 34 271 IPR034294 -
Alju05g1693 278 SUPERFAMILY Aquaporin-like 43 271 IPR023271 -
Alju05g1693 278 CDD MIP 49 265 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju05g1693 278 Pfam Major intrinsic protein 44 262 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju05g1693 278 NCBIfam MIP family channel protein 53 262 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1693 Alju-ChrAlju05 48097849 48100566 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1693 31 276 Major Intrinsic Protein MIP AT3G16240 84.211 6.89e-150 417