Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1679 ATGGTTGGTTCATTTAAGGCTTTGAGCCAACAGTTCAGGCTCCTCGTTTTCCATAAACGTTCCCTAATTTCAGCTTCTTGTGATTCATTTGGTTCCTCTTCCCTCACTCTCCCATCGCATCCTGCATACCCCAGGTTTTGTTTCTCGCAGTTTCGGTTGTATTCATCATCACCTTCTGCATTCATGGAGATGGTCACAGCAGTTTCTAAACATGGGCTTGAAGCTCATGACAGTGTTGCCATTAGAGCAGATCAAAAGAGTTATAGTTTCAAGCAGCTCATATCTTCTGCACAGGAGATATCAAATCTCTTGTGTGGAAATGACATGAAATCCGGGAATATTGGTGGAGCTCGAATAGGAATTGTAGCCAAACCCTCTGCTGAGTTTGTCGCTGCAATGCTTGGGACTTGGCTTATTGGAGGTGTTGCCGTGCCACTTGCACTGAGCTATCCAGAAACAGAGCTATTGTATGTGATGAATAATGCTGATGTGTCTGCAATTTTGAGTACTGAAGATCATAGTCAAACAATGCAAAATGTTGCCAATAAAAGCTCTTCTCAGTTTTTTCTTATTCCACCTGTTCCCAATATATCCTTGGAGAAGAGCATAGATGAAGATTCACAAAATAGAGAAATGCAGGAAGAAAGAATTCATCAGGCAAATATCAAAAGAACAAGTGAAGATCCAGCATTGATATTGTACACTAGTGGGACAACCGGTAAACCTAAGGGAGTCGTTCACACACATCGAAGTATCAGTGCACAGGTTCAAACCTTGGCTAAAGCTTGGGAGTACACATCTGCTGATCAATTTCTGCATTGTCTACCTCTTCATCATATCCGTGAAAACTTGAATGTTTATTTTGACAGCAATTCATATAATTTGATTAGGCATATTGTCATCTTTGTTTTGTTTGTTGGAGATTATACTATTATGATTTCAATCCTTAACGTACACTATACATGTTCATGGACTTTTCAATGCTTTGCTGGCCCCACTTTATGCTGGTTCCACGGTAATTTTACTACAAAATGCAATTTTCGATGCTGCTTCTCAAGCAAAGGAAAAATTAGAAAAACAGCTATTTTTAATGTTCAACTGGCATCTAAACTTCCCAAAACTCTGATGTCTTTCATGAAGGTTGACTTTATGCCCAAATTTAGTGTGAGCGGAGTTTGGCAGAGATGGCGTGAGTCCTATCCAGTTGAAGGAACTAAGACTGAGCATGCTATAACTGTATTCACTGGAGTTCCAACTATTTATACCAGATTGATACAAGGTTACCAAGCTATGGACCCTCAGTTGCAAGCCGCATCAGCTGCTGCTGCAAGGAACTTGCGTCTTATGATGTGTGGGTCCTCTGCACTTCCTCAACCTGTTATGCAAGAATGGGAAGCCATCACTGGGCATAGGCTGTTGGAACGATATGGCATGACTGAATTTGTCATGGCAATATCAAATCCCTTGAAAGGTGCGAGGAAGGCAGGCACTGTTGGCAAACCATTTCCTGGTGTGCAGGTTAAGATTCTTGCTGATGAAGAGAGTGGGAATAATGTAAATAAAGTGGGCGAGCTTTGCATCAAAAGCCCATCATTGTTTAAAGAATATTGGAAACTTCCTGAGGTTACAAAGGAATCATTCATTGATGATGGCTTCTTCAAAACTGGAGATGCAGTTACTACGGATGAAGATGGATATTACATCATTTTAGGACGTAACAATGCCGATATAATGAAGGTCGGTGGCTACAAACTATCTGCACTAGAAATTGAATCAGTCATATTAGAGAACCCAGCTGTGTCAGAATGTTGCGTGTTGGGCTTACCGGACAAAACTTACGGAGAAGTAGTTTGTGCAATTATTGTGGCAGAGGCTGAGACTAAGAAGAAGAGAGAGGAAGAGTCTAAACCTGCTATAACCTTGGAAGAATTGACCTCCTGGGCCAGAGACAGACTTGCACCTTACAAGATACCCACTCGATTGGTCCTTTGGGACTCTCTTCCTCGTAATGCAATGGGGAAGGTCAACAAAAAAGAATTGAAGAAATTGATGGCTCCAGAGCAGTAA 2067 0.4141 MVGSFKALSQQFRLLVFHKRSLISASCDSFGSSSLTLPSHPAYPRFCFSQFRLYSSSPSAFMEMVTAVSKHGLEAHDSVAIRADQKSYSFKQLISSAQEISNLLCGNDMKSGNIGGARIGIVAKPSAEFVAAMLGTWLIGGVAVPLALSYPETELLYVMNNADVSAILSTEDHSQTMQNVANKSSSQFFLIPPVPNISLEKSIDEDSQNREMQEERIHQANIKRTSEDPALILYTSGTTGKPKGVVHTHRSISAQVQTLAKAWEYTSADQFLHCLPLHHIRENLNVYFDSNSYNLIRHIVIFVLFVGDYTIMISILNVHYTCSWTFQCFAGPTLCWFHGNFTTKCNFRCCFSSKGKIRKTAIFNVQLASKLPKTLMSFMKVDFMPKFSVSGVWQRWRESYPVEGTKTEHAITVFTGVPTIYTRLIQGYQAMDPQLQAASAAAARNLRLMMCGSSALPQPVMQEWEAITGHRLLERYGMTEFVMAISNPLKGARKAGTVGKPFPGVQVKILADEESGNNVNKVGELCIKSPSLFKEYWKLPEVTKESFIDDGFFKTGDAVTTDEDGYYIILGRNNADIMKVGGYKLSALEIESVILENPAVSECCVLGLPDKTYGEVVCAIIVAEAETKKKREEESKPAITLEELTSWARDRLAPYKIPTRLVLWDSLPRNAMGKVNKKELKKLMAPEQ 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1679 688 SUPERFAMILY Acetyl-CoA synthetase-like 407 685 - -
Alju05g1679 688 CDD MCS 77 682 - -
Alju05g1679 688 Pfam AMP-binding enzyme 407 579 IPR000873 -
Alju05g1679 688 Pfam AMP-binding enzyme 76 286 IPR000873 -
Alju05g1679 688 PANTHER ACYL-COA SYNTHETASE 64 682 - -
Alju05g1679 688 Gene3D - 363 572 IPR042099 -
Alju05g1679 688 Pfam AMP-binding enzyme C-terminal domain 589 674 IPR025110 -
Alju05g1679 688 Coils Coil 203 223 - -
Alju05g1679 688 Gene3D - 55 290 IPR042099 -
Alju05g1679 688 SUPERFAMILY Acetyl-CoA synthetase-like 57 282 - -
Alju05g1679 688 ProSitePatterns Putative AMP-binding domain signature. 232 243 IPR020845 -
Alju05g1679 688 Gene3D - 576 688 IPR045851 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1679 Alju-ChrAlju05 47978255 47984555 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1679 425 684 Monolignol Biosynthesis Gene Families AT4G19010 26.471 2.10e-26 112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju05g1679 05 47978255 47984555 Alju05g1679 05 47978255 47984555 ECH